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Detailed information on CNT30580008


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287995Echinochloa crusgalliTriticum aestivum33.5724.7492.5594forward
CNT3016441Echinochloa crusgalliZea mays259.3787.1470forward
CNT30216655Echinochloa crusgalliKalanchoe fedtschenkoi25.7119.9491.6772forward

Expression of CNT30580008

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MQRSSCRRCGTRRSRGSPCSSSLADRCSP*

Sequence

>CNT30580008
GTTTCACTTCACCCTTCCAAGTATCCCTTAATTGTCGTCTATAACAAATTTAACATTTTGATTGCTGATACACATGCAACGCTCTAGTTGTCGTAGGTGC
GGCACTCGTCGGTCTCGGGGTTCTCCTTGCAGTAGTTCTCTAGCGGATCGTTGTTCTCCTTGAGCTTGTCCCGGGCGTGGCTCGCCACTGTCGACGCCAT
TTTGGAAGCTATGTACCGTTACAAACTTTTTGTGTGATTATTTTGATGTGGCTTTGGTTGAAGAACTGTACGAGGCGTTG