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Detailed information on CNT30579797


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30447360Echinochloa crusgalliSaccharum spontaneum33.1228.9887.58153forward

Expression of CNT30579797

Peptides detected in this lncRNA

>peptide 1 (32 aa)
GESNQFSAQRYANKNLAHSFLISFIAETTDEP*

>peptide 2 (56 aa)
ANQINSVLRDMRTKTLLTLFSFHSLRKQLTNHSERVTFIHHGMGEPTPNPTGNTGH*

>peptide 3 (29 aa)
WRIKSIQCSEICEQKPCSLFSHFIHCGNN*

>peptide 4 (32 aa)
MLIDSQDNLAAATGGPTLQFLQLPPESPRLPP*

Sequence

>CNT30579797
TGGCGAATCAAATCAATTCAGTGCTCAGAGATATGCGAACAAAAACCTTGCTCACTCTTTTCTCATTTCATTCATTGCGGAAACAACTGACGAACCATAG
CGAACGGGTAACATTCATCCATCACGGGATGGGGGAACCAACACCTAATCCAACGGGTAACACGGGACACTAAACTCAGGGGTAACTCAGATCGAACGGT
AACACGATGCTAATAGATAGCCAGGATAACTTGGCCGCCGCCACGGGAGGGCCCACCCTTCAGTTCCTCCAGTTGCCACCGGAGTCACCGCGGCTGCCGC
CGTAGCCACCACCACCGTAGCCGCCCTCACGGCGACCGCCGCCGTAGCCGCCGACGAAGCAGCGGTACTCCACATCCGCCGCCGCCATCTTCCTTCCTTC
CGACTAAAACCCTAGAACCGAGGACTTTGTAAGAGGGGGAGGAGAAGCCAACCCACCTCGAG