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Detailed information on CNT30579744


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30339139Echinochloa crusgalliEragrostis tef10.6723.3892.5954forward

Expression of CNT30579744

Peptides detected in this lncRNA

>peptide 1 (49 aa)
LRDMRTKTLLTLFSFHSLRKQLTNHSERVTFIHHGMGEPTPNPTGNTGH*

>peptide 2 (32 aa)
MLIDSQDNLAAATGGPTLQFLQLPPESPRLPP*

Sequence

>CNT30579744
TGCTCAGAGATATGCGAACAAAAACCTTGCTCACTCTTTTCTCATTTCATTCATTGCGGAAACAACTGACGAACCATAGCGAACGGGTAACATTCATCCA
TCACGGGATGGGGGAACCAACACCTAATCCAACGGGTAACACGGGACACTAAACTCAGGGGTAACTCAGATCGAACGGTAACACGATGCTAATAGATAGC
CAGGATAACTTGGCCGCCGCCACGGGAGGGCCCACCCTTCAGTTCCTCCAGTTGCCACCGGAGTCACCGCGGCTGCCGCCGTAGCCACCACCACCGTAGC
CGCCCTCACGGCGACCGCCGCCGTAGCCGCCACCTCCTCCATAGCCGCCGCCGCCGCCGTAGCCGCCGCCGCCTTCGCGACGACCACCATAGCCACCGCC
GCCGCCGACGAAGCAGCGGTACTCCACATCCGCCGCCGCCATCTTCCTTCCTTCCGACTAAAACCCTAGAACCGAGGACTTTGTAAGAGGGGGAGGAGAA
GCCAAC