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Detailed information on CNT30579357


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 4e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515406Echinochloa crusgalliJuglans regia15.0624.6181.6125forward

Expression of CNT30579357

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MGLTFLPMLRKFWPTPCLPALTFSGYCTSPLGKTR*

Sequence

>CNT30579357
ATCAATTCTTCAAGTTTATAATCGCTAGCTAGTTAACTACCCTGTGATTTTTTAGCAAGAAGGGCCGTAACGTTCGTCAGCGTGTGGGCATCTAACGACC
AGTCACCAAAATTAAATCAACATGTACATATAATTCCATGTAGCAGCTCCAGAATCACCAAGAAAGTAAAATTACATATCGACCCTCCATCAAACCACCC
AACAACACCATCATCAGCAGCTAATTAATTAACGATCGGATTGCGCGCGCGGGACGATCGACGACGAGATGAAGATTGATTCTTAGAGGTCGAAGGTGTT
CTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAC
TGCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTGGAGCGCAGCCTGGTGCCCAGCGCCAGGCACTGCTCCTTGCGCGCCA
GCTTCAGCAGGTTGGGCCCCTCCCGCATGATGGCGGCGCCGCCCGTCGGCATCTCGAACACCTGCTCCTTGGGGGAGCTCCACGTGATCACGTAGAACTC
CTCCACCTGCGCCTTGCGGAGGAGCCCGCGGCGCCTTGGCCGGCGACCAGGCGGCGGCCAGAAGGTGGCGCGTGGCGGCGGAGGCTTGCGTGGCCATGGC
CATGGCGGATGGGGATCGGCGGAGCTGGAGCTGCTGGAGCAAGATGAGAGGATGTTGAGCAAGTAGTGGAGGGCGCGGCGGTGGCACGGAGCTAAGAGGT
GAAGCTCTGGTTTGGGTGGCTGGTTTGGGT