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Detailed information on CNT30579233


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10HD0|CB23_ORYSJ, E-value = 5e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440221Echinochloa crusgalliAegilops tauschii45.6399.0489.29308forward

Expression of CNT30579233

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MGPFPVTMACTKNPNMENMARRPFLSSLTLSSAAVSGSSARPSGPSPSGPPPTR*

Sequence

>CNT30579233
GGTTCACTCACGAATGTTACACGTACCATTGATTCATCATCAGCTGACATAAGCATCCGTGCCTAGTTTCCAATCTCACACCACACGTACAGGTACAGGC
AGCTGCTGATCTGGTCACTGGTCAGCACAGAGAGCATACGCCGGCGCGTGCAAAACTACTACACGCCTACTGCAACAAAGCAGAGTAGAGTACACAGGGC
CACAGGGGCATGGCTCGAGCTCGCCGTCGCCGGAGCTAGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCACGCGTTGTTGGCGACCGGGTCC
GCGACGTGGTCGAAGAGGTTCTCGATGGGCCCCTTCCCGGTGACGATGGCCTGCACGAAGAATCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGA
GCTCCTTGACCTTGAGCTCGGCGGCGGTGTCCGGGTCGTCGGCGAGGCCCAGCGGGCCCTCGCCGAGCGGGCCGCCGCCGACGCGGTAGCCCTCGACGAA
GCCCATGAGCACGACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCCAGGTAGTCCAGCCCGCCCTCGGAGAAGATC
TGCGCGCCGGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTCTTGGCCAGGATCTCCGGGAACACGCAG