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Detailed information on CNT30579074


BLAST search results

BLAST vs Swiss-Prot:
sp|P85955|DRE1_PSEMZ, E-value = 1e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30136184Echinochloa crusgalliLolium perenne11.8320.4187.8899forward
CNT30340753Echinochloa crusgalliEragrostis tef22.137.2287.57185forward

Expression of CNT30579074

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MNTGVDLKTTGCPRRGSRRRSSRGPSPRRRRWSARRRR*

Sequence

>CNT30579074
AGAACAAACTTTGATTAACTCAAGCAATTAACAAGACCAGATGATTCTCATCAACGGTTGCATACGAAGGGAGAGGCGAGATGTTTTGGGAACGGTAATT
TAAGCTCTTCCTCGATCCAAAAAGTTACAAACTGGACAAGACCACACGTAATTTACAAGACATGAACACAGGTGTGGATCTTAAAACGACAGGTTGTCCT
CGACGAGGCAGCCGTCGTCGAAGCTCCAGAGGCCCATCCCCTCGTCGGCGGCGTTGGTCTGCACGGCGTCGGCGCTGAACAGGCTGTCGAGGGACTCGTA
GGCGCCGCCGTTGAAGTAGGCGAACTGGTCGCCGAAGAGGAAAGCGTCGAACAGCGTGTCCGACTCCTCGGAGTCGGAGGCCTGGGGCGACGCCTCGTCG
GCGCTCTCGGTCCTCGGCCGCTTGCTGGCGGACTCAAGGGCAGGGTGCGCCACGGGGACAACCTCGTCGTACGCCGACACGCCCTGCCACGAGAAGTCCG
GGAGGGCGCCGCCGGAGCCGGAGCCGGAGCCCTCGCTCTCGGTGGCCTCGGCCTCGTGCTTGACGGCGAGCGCGGCGGCCTCGGCGGAGGGGAAGGTGCC
TAACCAGACGCGGACGCCCTTGACGGGGTCGCGAATCTCGGCGGCCCATTTGCCCCACGGGCGGCGGCGGACGCCCTTGTACGCGGCGGCCTTGCGGCGC
CTGCCCGTTTCCACCGGCTGCCTCCTCGCGGGGGCGGGGGCGGGGGCGGAGAAGGCGAAGAGCTTGCTCTCCACCTCCTCCTCCGAGTCCTCGTCGAAGT
TCCGGAACGCGGCCTCGAAGTCGTCGGGCCTCCGCTG