CANTATAdb - search

Detailed information on CNT30578613

BLAST search results

BLAST vs Swiss-Prot:
sp|A2Y205|RBS1_ORYSI, E-value = 3e-81

BLAST vs NONCODE:
NONORUT002193, E-value = 0.0

Expression of CNT30578613

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPHPTTYSRSRYHSYIKSERDQVKQKQKQSTAGKIKRR*

>peptide 2 (49 aa)
MAAALASRGGRGCGRIGRRARAYPRAFVAGSRARGGVAPGSWVVAVVASR

>peptide 3 (54 aa)
MKLMSCTCLTLSKPMIRTNASGYAFLASSSSLSTWVASVHPNMGSFHMVQYLPS*

>peptide 4 (76 aa)
MHLILPPLLTLPKLELPERRAMGMPAVDLSPWKGATVVADDAITEGAISAAHQALSFFARVLLEMHCSAHRLPRYV*

Sequence

>CNT30578613
AGAAAGGCATTTCCGATGAACAACAGAAGCATGATTTTTTAATTCCATGATCAAATTTCATTGTCGACGAATTGATTGTTGGACACATATGCTCTAGGAT
TCACATCCATCTCATACCCTTTGTATAAATATATATAGCCGGAGCTTTCATAGATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGAT
ACCACTCTTACATCAAGTCAGAGAGAGATCAGGTGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAACAAACTGGGAACACAC
GAAACAAGGTGGGAGACATCATCGAATCAGAGATGAACAATTAAACGAGGCTATATATGACGATGACGGCTTAGTTGCCACCAGACTCCTCGCAGCCCGG
GGGCTTGTAGGCGATGAAGCTGATGAGCTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACGCCTTCTTGGCCTCCTCG
AGCTCCTTGAGCACCTGGGTGGCGTCGGTGCACCCGAACATGGGCAGCTTCCACATGGTCCAGTACCTGCCGTCGTAGTATCCGGGGGACCTGTGGTTCT
CACGGCAGGGCACCCACTTGGAACGGAGCAGGTACTCGATCTGCTTCAGGAGGTCCTCCACGGTAATTACCTGCATGCACCTGATCCTGCCGCCATTGCT
GACGTTGCCGAAGCTGGAGTTGCCGGAGCGGCGGGCGATGGGCATGCCGGCGGTGGACTTGAGCCCCTGGAAGGGAGCGACGGTGGTGGCCGACGACGCC
ATCACGGAGGGGGCCATCTCTGCAGCTCACCAAGCTCTCTCCTTCTTTGCTCGAGTACTTCTTGAGATGCACTGCTCTGCACACAGGCTCCCGCGGTACG
TATAAATAGCCAAAACTCAGCGGTCTCACCCTCCCTAGCTAGCTAATCGGATGGCAGCGGCGCTCGCGAGCCGCGGAGGCCGGGGATGTGGTAGGATTGG
CCGGCGTGCGCGCGCCTATCCGCGGGCGTTTGTGGCTGGCTCACGCGCGCGCGGTGGTGTCGCGCCGGGCTCGTGGGTTGTGGCCGTGGTGGCATCTCGA
C