« Back to Oryza barthii search


Detailed information on CNT30578611


BLAST search results

BLAST vs Swiss-Prot:
sp|P18566|RBS2_ORYSJ, E-value = 3e-121

BLAST vs NONCODE: nothing found

Expression of CNT30578611

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MHLILPPLLTLPKPELVERRLTGRPAVDLSPWNGATEVAEEAITVGAIAT*

>peptide 2 (81 aa)
DGFRYALGIILHEYVCIAGDLAFTCPVSPSPNDRPIVVVVLLQQRQVGARENNYVQLNTDTQKKKEKERTCTKERKRLVAA*

>peptide 3 (54 aa)
MKLINCTCLTLSKPMMRTKASGYAFFASSSSLSTWVASVHPNMGSFHMVQYLPS*

Sequence

>CNT30578611
GACGGATTCAGATATGCTCTAGGCATCATATTACATGAGTACGTGTGTATAGCCGGAGATCTTGCATTCACGTGCCCTGTCTCACCGTCACCGAACGATA
GACCGATAGTTGTAGTAGTACTCTTGCAACAACGGCAGGTCGGAGCGCGAGAGAACAATTACGTGCAGCTTAACACGGACACACAAAAAAAAAAAGAAAA
AGAAAGAACATGCACGAAGGAACGAAAGCGCTTAGTTGCCGCCTGACTCCTCGCAACCCGGTGGCTTATACGCGATGAAGCTGATTAACTGCACCTGCCT
AACGTTGTCAAAGCCAATGATGCGAACGAAGGCATCAGGGTATGCCTTCTTTGCCTCCTCGAGCTCCTTGAGCACTTGGGTGGCATCGGTGCATCCAAAC
ATGGGCAGTTTCCACATGGTCCAGTACCTACCGTCATAGTATCCGGGTGATCTGTGATTCTCACGGTAGACGAATCCGACCTTGCTGAACTCCAAGCAAG
GCACCCACTTAGATCGGAGCAGGTACTCGATCTGCTTCAAAAGGTCCTCGACCGTGAGCGGTGGCAGGTACGATAGGGTCTCGAACTTCTTGATGCCCTC
AATTGGCCACACCTGAATAAATAATGTAAAAATTTAAATCAGATTAATTTGAATTTCGTAACATGAGTTAATTTGATCCTTGACTTTAAAGGAGAAGCCT
GAGGAGGTATATATCATATATACCTGCATGCACTTGATCCTTCCGCCATTGCTGACGTTGCCGAAGCCCGAGTTGGTGGAGCGGCGGCTGACGGGGAGGC
CGGCGGTGGACTTGAGCCCTTGGAATGGAGCCACGGAGGTGGCCGAGGAGGCCATCACGGTGGGGGCCATAGCCACGTAGTTAGCTAGCTAGCTTACTGG
CTAGTAGTAGTAGAGTATGTCCAGTAGCAGTGCTGTTGAGGCCCTGTACGCTGGTTCACCAGC