Detailed information on CNT30578563


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002110, E-value = 7e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595610Oryza barthiiOryza meridionalis100.46101.8792.2218forward
CNT30371434Oryza barthiiOryza glumipatula100.4610094.5218forward
CNT30104359Oryza barthiiOryza rufipogon100.46100.4694.5218forward

Expression of CNT30578563

Peptides detected in this lncRNA

>peptide 1 (40 aa)
ASVHASLRLQVRLLQKKDLYRWGSAKRKEQGRFASRTKGR*

>peptide 2 (34 aa)
GLCARKLKVASSTPSKERFVPLGKCQKKRTRKIC*

Sequence

>CNT30578563
TGGCCTCTGTGCACGCAAGCTTAAGGTTGCAAGTTCGACTCCTTCAAAAGAAAGATTTGTACCGCTGGGGAAGTGCCAAAAGAAAAGAACAAGGAAGATT
TGCTAGCAGGACAAAAGGACGGTAAACTTGGGAAAAAAAGGTCCGAAAGAAAAGAACAAAGAAGAGCTGTTCGAAGGAGTCGAACTTGCTACCTCAAGTT
TGCGTGCACATAGGCCA