Detailed information on CNT30578550


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001257, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697615Oryza barthiiOryza sativa28.91101.0598.222017reverse complement
CNT30555580Oryza barthiiOryza glaberrima51.7156.7399.563608reverse complement
CNT30597168Oryza barthiiOryza meridionalis18.2371.9595.051272reverse complement
CNT30110006Oryza barthiiOryza longistaminata18.666.9896.151298reverse complement
CNT30104438Oryza barthiiOryza rufipogon56.358.399.133928reverse complement

Expression of CNT30578550

Peptides detected in this lncRNA

>peptide 1 (33 aa)
SRRMQGGCCRGGRGASCTLTRRGSWQRMVRTSN*

>peptide 2 (35 aa)
MEWRKHLIHQRLFLTMTNPIQQASISLVYKCSYYK*

>peptide 3 (31 aa)
MTNVIYQENHNGITTSFLSAQDELPLPFVHR*

>peptide 4 (31 aa)
IEEDAGWLLQGWKGRILYAHSAWVVAEDGAH*

>peptide 5 (30 aa)
MLAHVNKLTEGICQSIHTQKGRYYKNKLSF*

>peptide 6 (29 aa)
MLGLDFPKITVTRSCLQTDGAYIATLLTQ*

>peptide 7 (35 aa)
MQTGPSRNQILLLRTPPWFIKQLFLLRRNFNQMAL*

>peptide 8 (31 aa)
MYFLHFQYVVRHCTLIGSKSKNNQKSLAHEI*

>peptide 9 (99 aa)
DRGGCRVVAAGVEGAHPVRSLGVGRGRGWCALATSRHDDVRVFWECLFAVGSVEFMVFGLFHIPAATSVGELTVVTTSLVAIILSAASAQDELPLSTNE*

>peptide 10 (37 aa)
MTMFVCSGNACLLLDQWSLWSLDCFISLQQLALESSQ*

>peptide 11 (36 aa)
MLYISCSVSMALPHKAKNSHWQATMCSCLRSFLGKS*

>peptide 12 (64 aa)
MGPSSTKKKQRGSGCIYRGAERRTTEEETESVGWSRVASGIGGRPPILVAVGVGDETRRCYLALF

>peptide 13 (56 aa)
MVHKAIVSTQKKLQPDGFIMLRSINVLEINLQINFTQSSQKISESPSQPCNIVRKK*

>peptide 14 (49 aa)
MQFQSHKKNDATKQVLRTKLKLRKNASHLARTCKGHRRMKWKFHTCRYI*

>peptide 15 (45 aa)
MAATSLVMPRKNTHKQYLFELVSHALLDIDTSNGTVIALTSNKQP*

>peptide 16 (65 aa)
MDKITMLQLRIIKTNYHVTTIIQTKSVYGRLYHLIITISNIRGKLNEHTNYKMTPNQHTRGPIIC*

>peptide 17 (58 aa)
MKCYNATFNTHKMKARENNATRAIEFHSIQTKSVYGQNYHVTTQDYQNKLPCYNYYTD*

>peptide 18 (39 aa)
MLIPRDLSTVGVTAFLSLVLSLGNVQVQAPPIFLQFCSF*

Sequence

>CNT30578550
GATCGAGGAGGATGCAGGGTGGTTGCTGCAGGGGTGGAAGGGGCGCATCCTGTACGCTCACTCGGCGTGGGTCGTGGCAGAGGATGGTGCGCACTAGCAA
CTAGCCGCCATGACGATGTTCGTGTGTTCTGGGAATGCTTGTTTGCTGTTGGATCAGTGGAGTTTATGGTCTTTGGATTGTTTCATATCCCTGCAGCAAC
TAGCGTTGGAGAGCTCACAGTAGTAACAACAAGCTTAGTGGCAATAATCCTTTCAGCTGCTTCAGCACAAGACGAGCTTCCATTGTCCACCAATGAATGA
CTAATGTAATATACCAGGAAAACCATAACGGCATAACCACTAGCTTCCTTTCAGCACAAGACGAGCTTCCATTGCCATTTGTCCACCGATGAACGACCAA
CCAATGTAATAATACCAGGAAAACCACAGACCAGACCACATAACCACAGATTAGAGTTCAGTCCTTGAAGATTGCTGAAGTTCGATGCTGATCCCACGGG
ATCTTTCAACTGTTGGCGTTACAGCCTTTCTTTCTTTGGTGCTTAGCTTGGGCAACGTACAGGTACAGGCACCGCCCATATTTCTGCAGTTCTGCTCTTT
CTGAAGCTTATTGGGCGAAAGATATTGCCGTGTCAACATTAGTGACCACTGACCAGCCAACACAACATAAGATACTTCTCACCGAGATCACCCCAACACA
CACACACACACAACTCAAAAACTTGAAGAAATCGGTGCCCCCTCCACTTTCATCCGGGCTTGGGACCGGCACTGGCAGTGTTAGGCACCCCCCTACCCCC
AAACATAACACCCCAACACGTCAAGTGAAAAAAAAATTGGAGCACCTCTGACAGTTAAACAGTATGAAGTTAGTGAGTATAAAGAATAGATCGAGTTAGC
TACCCATAGCCCATCATAGCATCTACCAACATCAAGGAGAGCAAAAACGTCGAATAAAGCAACTATCGTCATAATCAAATACTAGTAATTCACCACAAGC
AACCTAGGCAGAAGGAGCTATATATAACCATACCGACGAAAATAAACAAATGCAAATGCAGTTTGCATTAGACTAACAATGCAAATGCGCATAGAAAAAC
AGACTAACTACCACCACTAGGTTCCGGTAATTATACTAGTATATGCTAGTTTGCCAAACAGGTAGATAACATGAACTAAGTTCAACATCTAAGGATAACT
GGAACGCTACGCTAATAAATTTAGCTAAAACCAAATTTTCCGAATGAAATCGTCTTATCATTGATTAACCGATTTTCTGTGCTAAATTTTTAGCATCCGA
CAAGTGGAAGTCCATACTCAATATTGCCTTCAAAGGATATACATGAAATACAAAGTCAGCACAAGTGCATTTTCAGAACTTAGGACATTCAACATGGTTA
ATACTCCCGACACATAATTTAGGATATTCAACATGGTTAAATACCACAACACATATCTCAATTATTAGTGTACTATGCAAAGAAAAAAATTAGATTAAGC
ATGGCGACGTTACGGAGTAAAAATTATGTTCGGATTATATATTCCCTAAATAAATGTTAGCTCATGTAAACAAACTGACAGAAGGTATATGCCAATCAAT
ACACACACAAAAGGGAAGATATTATAAGAACAAGTTATCATTTTAATAATATTTAATTTAATTACATATTCATCATCCTGTTAAAGATCATATCAAACCA
CGTTTGAATGGATAAGTCGAAAATATTTTAAATAATATAGATTCAAAACTATGTGCACTATATTAAATTTAATTCCATATCCATCACCCTATTAAGTAAC
TTACTAAATCAGAACTGTAGTGCATCAAAGGAAATAGCTGAAGAAAACACGACATAAATCAGAAGAAACTTGGCAAATGATCAAGTCATAATAAAATTAC
ATTAATGTAAGCATTTTAAGTGTATCACATTGCAAAAAACATTTTGAAGACATCTTCTGATATGTACTTTATGCACAATAATAGGAGGTAAATCAACGCA
TAACCACACAGAATGGGCAATGACACACGAAATATGATTAAACAAACATGAGCTGGTAAAAGAAAACTAAATACATAATTACTAGCTCAGCAATTTCCAT
AAAAAAAACATACAAACACTATATCTATTTGACCTCAATCTCATGAATTACTAGATCTTCACAAGTATTCGCATAGTAACACAACATATATTGACATCAA
ATAAATAAACATCAGAAAGCAACCATAGAACATAGATATGATACTTTCTAGCCTTTGGAACAGAATGCAGATGGAAAACTAATCAGCAAGAATGAAATGT
TAATCACGCGAACAAAATTTAGTAAAAAAACAATTTTTGGGAATGAAATCATCTTATCGTCATGCAAATGATCATTTTTACTAAATTCCAAACATCTGAC
AACTAGAAGTCCATACTGTAACATGAAAAAGACAATATTTGGCAGAAAGCTCATGTAAAATATATTCTCACACAGCTGAAATCATCTGGTGCCAGTGGAT
TTCAGAATTTAGGACATTTAACATGATTAATACTTGTACATTCCAACACATACAACTCTAATTTAGCACCTTATTATGCAAAGCAACTAAATTTGGATTG
AGCGTGTATAGCAATCACTATTAACAACATTAAAAATGTTAGGATTAGATTTTCCTAAAATCACTGTTACTAGGTCATGTTTACAAACTGACGGAGCATA
TATAGCAACATTATTAACACAGTAAAGAAAATGTTAGGATTAGATTTTCCCTAAATAAATCTTACTAGGTCATGCACACAAACTGATAGAACGTACTTAC
GTACATGCCGACACACACATAAGGGTAAGGCATTAAGAGAACAAGTTATCAATTTTTAATAATATTCAATTTAATTGCATGTTCTAAATCCTGTTAAAGA
TCATATCAATTCAGGAGTCAGGTGGTGGAAAGGATAGGTTTAATAAGTAGCTATATAGATTCAGGAGTCAGGACTATGTGCATTATATTTAATTAAATCC
ATCATCTTGTTAAAGTAACTACGAAGACTATCAGAACAGTACTGCATCAAAGCTTGGTTAGGGATCAAGTCATTATCAAAATGATATTAATGTAAGCATT
TTAGGTGTATATCACACTTAAAACCATTTTAAAGTCATTTTCTGATATGTACTTTTTGCACTTTCAATATGTCGTACGTCACTGCACTCTAATAGGAAGT
AAATCAAAGAATAACCAAAAATCATTGGCACATGAAATATAATTAAACAAAATTCTTGCAGGAGCTAAAGTAAAAGAAAACTCTAATTAAACCAAATTAG
CCGCCTTATTTATAAAAACGCGAAAGGTGTGAAGGCATCAAAGCTTTTAATAGCAATACAAATGGCAGCTACTAGCTTAGTAATGCCTAGAAAGAACACA
CACAAACAGTATTTATTTGAACTTGTATCTCATGCATTACTAGACATAGACACAAGTAATGGCACAGTAATTGCATTGACGTCAAACAAGCAACCATAGA
ACATTGATACGATATTTCTAATATTTGGTTATGCAGATGGAAAACAAACAATCTGGGAATTAATAATTAGCAAGAAAAAAAAATGAAATGTTAAGGCGCT
AGCTGGATATAGGATATATTTAGCACAAAGAAAGCATCAAGTTTTAGACCATAAAATAAAACTATTTGCCTAGAATAAATTAATGCTACAAAAACTAAAG
CACCTATACATTTAGCCAAAAAGAGATTACTAAAACCACCAGATAATGTATGAAGAGATTTAAGGTTGGTTCAAATTAAAAAGACAAACTGAAAACATGC
ACACAGAGTTGATGCACAAATAAAACAACTGGTGGACAATCAAGGTTCTCAAAACCACTATACTAGTCTAATTAGACAAATAAAATGGAGAACTTGTATG
CAGTTTCAATCACAGATTTATTGACAAGAGAAATAACCAGTTAGTGAATTCTCTAGCTTGTATGCAATTTCAATCACACAAGAAAAATGATGCAACAAAA
CAAGTCTTAAGGACAAAATTGAAACTAAGGAAGAATGCTAGCCATCTAGCAAGAACATGCAAGGGCCACCGTAGAATGAAATGGAAGTTCCACACATGCA
GGTATATATAAAAAAAAAGGAAGAAGGGATTCTACACAAAACAAGGTCCCAGTTGAGCTAAGTTTATCTTCACAACGTATAATAAAATTGATAACTATAT
AAAGCATTACACTGGACAAAAATACTAATAAGCATGCACATTTAAGTGAATTAATACATGCAAAAGGATGCTATATATTAGTTGTTCTGTTAGTATGGCA
CTACCTCACAAGGCAAAAAATTCTCATTGGCAAGCAACAATGTGCTCTTGTTTAAGGTCCTTTCTTGGCAAATCTTAATTGGGGATACTATGTTGAATGA
GATATAATAATTATAAAGAAAGAAATATACCAGACAAACTGTAAGAAGAAACAAGTTAGTGATAATGTGTTGTTGTGATTAGCAACTAAGTTCAAGGGAT
TCACCTCAATTCAAAAGCCCTGGACATAAGATATATAATTTAGGACAATTCCTATCAAGCATAATATTTAAAAAACATCCACATTTCCATCTTTTATGAG
CCTAAGCAAAAATTGCCTCGACACTGTAAACCTCAGTTATCTACCAAGTTAGTATAGAAGATGAATAACTTTCAAAACTGTGGAAGCTGCAAGACGATCC
AAAATATTCCTGGAAATATCCTAGTTCCTGAATGAAGTGCTACAATGCTACATTCAACACTCACAAAATGAAAGCAAGAGAGAACAATGCCACAAGAGCC
ATAGAGTTTCATTCTATACAGACTAAATCAGTATATGGACAAAATTACCATGTTACAACTCAGGATTATCAAAACAAATTACCATGTTACAACTATTATA
CAGACTAAATCAGTATATGGACGTCTATATCATTTGATAATTACAATTTCCAACATCAGAGGGAAGCTTAATGAACACACAAATTACAAGATGACACCAA
ACCAACATACAAGAGGGCCAATCATATGTTGAAATGAACCCATAGCCTAGCTAGTTATGGAACAGTACAAGCCCATATGTAAAGGATACTATTGGAGATG
CAAACTGGACCAAGTAGAAATCAAATACTGCTACTAAGAACTCCTCCATGGTTCATAAAGCAATTGTTTCTACTCAGAAGAAACTTCAACCAGATGGCTT
TATAATGTTGAGGTCCATAAATGTTCTTGAAATAAATCTTCAAATTAATTTCACCCAAAGTAGTCAAAAGATTTCAGAATCACCTTCACAACCTTGTAAT
ATTGTTCGAAAGAAGTAACTGCCAAATGAATCATCTACCACAGAAACTTTAGGATGTGTCTTCTTAGTTACTACATAACCACCCTCACAGCAAGTTAATA
ACTGACTGATATAGCTTTTCCGGAAGTAAACAAGTTAACATCAAATTCTCGGAGAACTATGGCCATGTCTATGTTCTGACAAGACAACCATAAAAGCGCA
GCAGGATGGACTTAAATAACCAGAGTTTTCCAAGCAGACAAATGGCCTCCAAATAATATCAATCTCACTTGTTATTTTGACCCAAAAGCGTAGCAGCAGT
CTTGAATGGAATGGAGAAAACATCTTATACACCAAAGACTATTCCTAACAATGACCAATCCCATACAACAAGCTTCAATTTCTCTGGTTTATAAATGTTC
GTATTACAAATAAAATGTTCTTGGACAGTTGCTTGTAATGGAAGCAAACCAACTGCACAATATTGACATATTGAAATTTCAATAAATTGCAATTAACCAT
AGCCCTAAACCAAAGCATCAAGATTCCTAAAACTAACACCAGTAAACAGGGAAATCACGAGATCTGTACCTCAAACTGAGCAGGTCAAGCAGCAAGTAAT
CTGTAGTTCCTGTACTAGGATAAATTAATCCACAGGGAAGGCAGTCAAAAAGAGCTCCTTAAATCCTCGCGAGAAATCCTGATGTTAAACTTTAACTAAG
AACTGACACAGAAGAATCATTCCAACGCCCTAGTTTACCTCAAACTCGAGCACATAGTGACGATTTTTATCAAAGCCAAAAAGCAATACATGGTCCGGTT
AAGATGACACCCAACCATATTCAAGATAATCTGAAGAGTATGTCTTGCCGAAATTGAACAAGTTAAAGCCGGTGATTTGAAAGCTCTGAACAGACCTTAA
ATTTTCTGATATGACTTGACCTTATCATAAAAATTACTAGATCCGAAGGAAAAACTGCATAGCTGCAAGCAGACGAACGGTCTCAAACAAAACCAAGCAT
CACGAACTTGAAAGGAACCGAAAAATAATCTGAGGCAAGTGAGCAATCCTAACCATGACCAATTCAGAGCGAAAACTTCAGTTCATCTAGCCTTTGATCA
AGCCCAAAATATCCATGACAAATCCATCGCACCAAACATGAATTGACACAAACCAACCGATCGCGCATATTATACCCAACACAGCAAACCACAATTAGCC
ATAAACCAATCGAAAGAGATACTGTGTTCAGAAAACTAACACAACAGCAGAAGCAAATCGCCGAAACTAGACCCCCCCAAACCGAACGGATCAAGCACCA
GAAAAGGACGAGCAAGCGGGCAATCTATCCGGCTAGTTGGTGCACCTGATCATCAATCAACAAACGGCAGCGAACGAGGTGAGATCGAAACCGATTGATC
CCTTACCTACCGACTTACCAGCCCACCCGCGGCGGAGGGGAAAAGGGGAAGAATGACCGCGCGAGAAGAGGAAGGAAGCCATGGGACCATCCTCAACGAA
GAAAAAGCAGCGAGGATCGGGCTGCATTTATAGAGGAGCGGAGAGGAGAACCACCGAGGAGGAAACCGAGTCGGTGGGCTGGAGCCGGGTTGCGAGCGGA
ATCGGTGGTCGCCCGCCTATTCTTGTCGCGGTCGGAGTCGGAGACGAGACTAGGCGATGTTATCTGGCGCTTTTTCC