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Detailed information on CNT30578459


BLAST search results

BLAST vs Swiss-Prot:
sp|O49290|CPPM_ARATH, E-value = 6e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30604894Oryza barthiiOryza punctata71.9714.986.46362forward

Expression of CNT30578459

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MSSQESRPTRLLNSAKVVRGDLMRWNPISMSSCLVCSGVFPPSSMLHTR*

Sequence

>CNT30578459
ACAAAATTCACCAATAATGCAGGAGAATTAATCAATGTAATCCACCATATTTCATGGCTCCCTGATGGCCAGCCACATTTCGATTGATAATTTATTCCAT
TGGTAGCTTGATCTTGATCGATCTTAGTGTACCCCATTGGTAGCGCCATTGGTAGCTCCGTTTCCGGCAACGACGGCGGCCGCCTTGGCCTTAGCCTTCT
CCATCTCCGTCGTGGTCGTCGTCTCCGGCGCCGGCAGTGGCTTGGGAACGGAGGAGTTGACGGAGAAGCGGGCCTCGATGTCGAGCCAGGAGTCGAGGCC
GACGAGGTTGTTGAACTCGGCGAAGGTGGTGAGGGGGGACTTGATGAGGTGGAACCCCATCTCCATGAGCTCCTGCCTCGTGTGCAGCGGCGTCTTCCCG
CCCTCCAGCATGTTGCACACGCGATAACCCTTGGTCCTCCTGCAGATCTCCATCAGCTCCTCGTCGCTCCGCGGCGCCTCCACGAAGCACGCGTCTGCTC
CCG