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Detailed information on CNT30578441


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697931Oryza barthiiOryza sativa87.8843.0398.34602forward
CNT30555588Oryza barthiiOryza glaberrima82.9251.3197.36568forward
CNT30597186Oryza barthiiOryza meridionalis82.4894.4896.81565forward

Expression of CNT30578441

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRYVFDPMKNVRXIWVIXPACWLLHGMIYSV*

Sequence

>CNT30578441
AGGTTTAGTTTTCCNTTGTTTCGGAGGATNNTTCGTTCGTTGGANNAGTTCCTNAAGACGAATTGAAGACGCTTGTTTGTAAGGCTTGGGAGAAGAACTT
CAGGGTGTGACACCTCGCGATTCCCAACCCTAACCGCCGTCTCCCCGCCCCNAAGGTCTNNGGCGCGTGCTCCCCCCAACCACCGGCGCCGATTCCCAAC
CCTGCACGCTGGAAGCTCTCCCATCGCCAGGTGTTATATATAATTTTGAGATACCGGTCACGCCGACGCCGTCTTCTCCCTACTTCACCCACAGGGTGAA
ACGACAGTTGAAGGTTACTAGAGCGTTTGGTGCAGGCTTTCTAAATAAGATACAAGTGAAGCTATTTGTGTNAGCTCTAGCTGTACCAAAATCTNTCGAG
TTACATTGTTGAACAAAGTTGGTATTGGCTGTGCAACCAGATCAGTCGCACAGGACTTTGTCCAAATTGTGTGTGTCATTCCTAATGGATGCATAAACAA
TAATAAAACTTTTGTATGCGATATGTGTTTGATCCTATGAAGAATGTGAGGGNGATTTGGGTGATCTCNCCAGCTTGTTGGCTCTTACATGGCATGATTT
ACAGTGTGTAAAAAAACATGACGTGCTCTGTAAGAATTGATGAGTCTTGTTCAATATAAAAGCAGAACTATCGATATGCCGTGGA