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Detailed information on CNT3057841


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641314Amborella trichopodaNymphaea colorata31.398.784.8886forward
CNT30315049Amborella trichopodaCorylus avellana24.8210.1891.1868forward

Expression of CNT3057841

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MGGDRLAFLGSLISAAHLPHGLWRMPLNTFLRFLLALLSGKDEVFSSGT

>peptide 2 (53 aa)
PAQMISRSPRFGPTIGPYSRRSCSLDRRRYGPHRTVPKRRSQWVVIAWPSWGL*

Sequence

>CNT3057841
GCCAGCCCAGATGATATCTCGTTCACCTCGTTTTGGTCCCACGATAGGTCCGTACAGTCGAAGGAGTTGCTCCCTTGATCGGAGAAGATATGGACCACAT
CGGACGGTCCCGAAGCGCCGATCGCAATGGGTGGTGATCGCTTGGCCTTCTTGGGGTCTCTGATCTCAGCCGCCCATTTGCCCCATGGCCTCTGGCGAAT
GCCCCTGAACACGTTCTTGCGCTTCCTCTTAGCGCTCCTCTCGGGCAAGGATGAAGTCTTCAGCTCTGGGACCT