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Detailed information on CNT30578303


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553740Oryza barthiiOryza glaberrima8376.6796.99332forward
CNT30596193Oryza barthiiOryza meridionalis84.544.1893.79338forward
CNT3099619Oryza barthiiOryza rufipogon8358.3595.78332forward

Expression of CNT30578303

Peptides detected in this lncRNA

>peptide 1 (53 aa)
CNVPPLPDRAHLHLIAFIGYRLPTPGQERPLLATSMCPVPAHVPCRVTTPGLH*

Sequence

>CNT30578303
TTGTAACGTCCCGCCTCTCCCAGACCGGGCCCACTTACATCTGATAGCTTTCATAGGTTATAGACTGCCAACCCCAGGCCAGGAACGTCCTCTCTTGGCC
ACATCCATGTGTCCAGTGCCAGCGCATGTGCCATGCCGTGTAACCACTCCCGGTCTACACTAGCCATGCGCACCATGCCTACGCAACTGTGACACACGCG
CCCGTGAAACCGCGAGAGTCGGCTCTGATACCATTTTGTAACGGCCCGCCTTCCCCCAGGCCGGGCCCACTTACATCTGATAGCTTTCATAGGTCATAGA
CTGCCCTCACAGACCAACACATGTCTTTTCTGCACACTTTGTCCTCACTCGTATGCACCCGGGAAGAATTTCCCGATCGGTCACCCATCCCAAATTGCTC