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Detailed information on CNT30578211


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENH6|RR14_ORYNI, E-value = 2e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30232496Oryza barthiiAnanas comosus36.7637.9488.44225forward
CNT30207127Oryza barthiiHelianthus annuus10.7822.0792.4266forward
CNT30683954Oryza barthiiTriticum urartu41.189.0290.08252forward
CNT30585620Oryza barthiiEchinochloa crusgalli32.033.8290.82196forward

Expression of CNT30578211

Peptides detected in this lncRNA

>peptide 1 (38 aa)
TFGVKISVCCLVACMKTYWRLQILFDCCMKLSLVTFFS*

Sequence

>CNT30578211
GTACCTTCGGTGTTAAAATCAGTGTATGTTGTTTGGTTGCTTGCATGAAAACATATTGGAGGTTACAGATTTTGTTTGATTGTTGCATGAAGCTGAGTTT
GGTTACCTTCTTTTCTTGAAGGTGAGATTATACCTCCTTTCATTTTCATAATTAAGACATGTGCAGGCAACCAAACGATCCATCTAATCCTTTTAGTATT
AATTACTCTTCCATGTGATGCTCTTGCCTTAAAAGAGAGAGGAACTAGTGGATAAAAGGGGGGTTGAATACGCCCCTCTACCATATCTATACAAATAGAA
TAGTCCATTTATACAGAATAGTAAAGAGGGCTTTTCTACGATCATCAATTCCATAAATCCATACAAATACGAAGGGTATTTTATCCTTATCAACTGGATC
TTCTTGCACCCGGTAACAAACATACATAAACCATTTCTTGAAGTACGTGTCCAGATAGCCCAAAGTCTCGATAGTTAGCTCTAGGTCTTCTGGTAAAAAA
ACAATATCGATAAAAGCGTGTCGGTGCACTATTACGTGGCAGGGATTGCAATTTTTCTCGCATTTTCGTTTTTTCACTCAAACTCAAAGGGTAAACTTTG
CTTCATGTTTTT