Detailed information on CNT30578161


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000248, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555414Oryza barthiiOryza glaberrima55.356.899.413064forward
CNT30371298Oryza barthiiOryza glumipatula41.5641.0799.442303reverse complement
CNT30109436Oryza barthiiOryza longistaminata41.5841.0798.222304reverse complement
CNT30104296Oryza barthiiOryza rufipogon35.0395.0199.071941forward
CNT30117812Oryza barthiiOryza nivara36.7655.2698.432037reverse complement

Expression of CNT30578161

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MEWRNHLIHQCLILAMTNSYHRLQFLWFQYAKNVHNAD*

>peptide 2 (35 aa)
MYDIFRKILWVISNKVQEIYVNFKSAINSYKKHNI*

>peptide 3 (65 aa)
MVIYKLIKYIIVKINYHITTTLQTKSGHGSPNHLIITISNIFRMLKEHIEDNAPNEQTKGQTILD*

>peptide 4 (30 aa)
MLYRRLKIQRKFKSLHSKRNQRVAKKKGAA*

>peptide 5 (41 aa)
MTPFRISITLNHLQIIFSLVGIKQINISLVLSELNKLTSVI*

>peptide 6 (41 aa)
MKITGFVPQTEQVKQQVICSSCTTIKIIHREGSQKELLKSS*

>peptide 7 (40 aa)
MIKQIIARVKENKRLNSTQIILFRTQKASELLIALQNGSY*

>peptide 8 (41 aa)
MFKCSDMTYLPIKLPDLKEKPQSAELQATELSLTTSITTLK*

>peptide 9 (44 aa)
MCRIFCRALPSTASTNELQAQKFDADHTREQLLTFRNARRYFCI*

>peptide 10 (51 aa)
MNCVILYEEEGTHYIAHPYRQKKIVYISCSVSMELSTQHTQHSNNLFGKRQ*

>peptide 11 (44 aa)
MTKEVAPVLNGMEKPSYTPMSNPSHDQFIPQASVSLVSICQKCS*

>peptide 12 (44 aa)
MAHFTLNHRIYFSEQESKFSSINFLETNLQIIFTISQKIPASPS*

>peptide 13 (38 aa)
MVNNVLETKILNVQTRMNHYPRQIKRRPMTLQSKANNS*

>peptide 14 (39 aa)
MKYKVSASAFRTRTSNMVNTTPTRTPQALVQTIHRNEAT*

Sequence

>CNT30578161
CGGGATGTATCATGTATGAAGGCTAGCTCAGAAACATAGATAGCTTATTAATTCAGTGTCATTGCAGCTCATGTGCAGGATCTTTTGTCGAGCTCTGCCT
TCCACTGCATCGACTAATGAACTGCAAGCGCAAAAGTTCGATGCAGATCACACGAGAGAACAACTGTTGACGTTCAGAAATGCAAGAAGATACTTTTGCA
TATAACTGTTAGCAATTCTCAGTTCTCACCGAAAACACCCCGACACAGTGCCCCCTCCACTTTTATCCGGGCTTGGGACCGGCATTGGCAGTGTTAGGCA
CCCCCTACCCCAAACAGAACACCCCAACATTCCGTCTACAGATATGAAGCAAGTGAAAAAAAAATTTAATTCAAAGGCAAAAGAATCAAGTTAAGCTACC
CATAGCCCATCAAACATCAAGGAAACCAAAAGGTTTAACACAAAACAACTATAATCACAAATCAGTCATCAGTAATTCACAGAGCTCTACAAGCAACCTA
TATCAGAGGGAGCTATACCAACGAAAAGACAAAATTCAAATGCAAATGTAACAATCACAGTAAAATATACTGGCAGTGCAAATGCGCATAGGAAATAGAC
ATTCTTGCTTACAAAGCAGGCAGATAACAATACACCTAGTACAACACACCTCATGATAAATGGAAGATCCCATTCATTCTTTCAAGGAACGACAACCAGT
AACAATCAATATTAGAACAACATGAAAAGGACGGTTGGTAGAACGCTTATGTAAAATATTGATCTCATCCAACTGAAATGATCTTAGATTATTGTCTTCA
CAGGATGTAAATGAAATACAAAGTCAGCGCAAGTGCATTCAGAACTAGGACATCCAACATGGTTAATACTACTCCAACACGTACGCCTCAAGCATTAGTG
CAGACTATACACAGAAATGAAGCCACATAATTTGGATTGAGCATACCGAATTTAATTGACACAGTCAAAATGTTAGGATTGCATTTCCTAAATAAAATGA
TGTACACAAACTGACAGAAGGTTATAGGCCAGGACAATTATAATAACAAGTTATCATTGAAGCAATGTTTAATTTAGTTGCACATTAATCATCTTGTTAA
AGATCATATTGAACCACGGTGGAAAGTATAAATCCGAAATATTTCAGTTATTATACATTCAGGACTATGCGCACTATAGTGATTTTATTCCATATTCATC
ATCCTGTTCAGTAAACTATAAAAACTAGTATTTACTATCACATATATCAATACTAAATCAGAACTGTAGGTGCATCGCTGATCACATATCAATACTAAAT
CAGAACTGTAGGTGCATCACTGATCACATATATCAATACTAAATTAGAATAACAGCTAATGAAGAAAACACAAAACAGAAATCAGCATAAGCCAGGTCAG
TGATCAAGTCATAATCAAGAATTCAAGATGACATTAATGTTAACATTTTTAGGTGTAAATCACGTTGCTAAAAAGTAAAAACATTTTAAATATGCTGATT
AAAAAAATTTTCTGATATGCACTGCCAATATGTTGTACAGAAGATTAAAAATTCAGAGAAAATTTAAGTCTCTGCACTCTAAAAGGAATCAACGGGTAGC
CAAAAAGAAAGGAGCAGCATGAACTATGATTAAACAAATTATTGCCAGAGTAAAAGAAAATAAAAGGCTCAATTCAACCCAAATTATTCTCTTTAGAACT
CAAAAGGCATCGGAGCTTTTGATAGCATTACAAAATGGCAGTTACTAACTCAACAATGTCCAGAAAAAAACACTATATTTATTTGAACTTATATCTCATA
CATTACTAGACACAAACACATACAAAAACACAAGTTTTCACACAGTAATCCCTTCATATTTTGACATCAAACGAACAAACATTAGGAAAGCAACCTAGAA
CATTGATATTATATAGCCTTTGTAACAAAATGTAGATGGAAAATAAGCAAAGCTGGAATTAATAATTAGCAAGAAGAAATGAAATGTTAAGGATATATAG
GACATAGGATATATTTAGCTCACAGAGAGCATCAAGTTTTAGACAATAAAATAAAAAAATAACTAAAAGCACTTAAGCATTAAATAAAAATAGATTTAAA
ACCACCAGATAATATGGAGCGATTAAGACTGGTTCAGATTAAAAAAAAAAAATTGAAACCATGCACATAAAGTTTGATGCATAAATAAAACCACCATATT
GCTGTTTAGCTGAACTATAAAGGATTAGTATTCTTCAAGTTCGCTTTAGAAAATTCACCTTAAATGACATAATAATAGAATGGTGAACAATGTTCTTGAA
ACTAAAATTCTGAACGTACAAACAAGAATGAACCACTACCCAAGACAAATAAAACGGCGACCTATGACACTTCAATCGAAGGCAAATAACAGCTGATGAT
TGCCCTAGCTTATTTCACATAAGAAAAATGACGCAACAAAACAAACCTAAGGACAAAATTCAAATCAAATAAAGAAAAGAGTGCTAGCCATCTAACGAGA
ACATGCAAGGACCATACTAAAATGAAATGGAAGTTCCACACATGAAGGTATATGATACAAAGAAAGAATTCTACACAAAACAAGGTTAGGTTGAACTAAT
TAATTTATCTTCAAAGCATGAAGATATTGAAATAAACAAGCACTACCCTGAAAAAACTAATAAGCATGCATACTGAGTACATATTCATCATAAATAAAAT
AAATGAAACTGTGTTAATCAAGTGATACATTTTGAATAAATGTCATAATATTATACGAAGAGGGCACCCATTATAGCTCATCCATACAGGCAAAAAGATA
GTATATATTAGTAGCTCTGTTAGTATGGCACTACCTACACAACATACAAACAGTCAAACAAATAAATGAAAGTGTTAATCAAGTGAGACATTTTTATGAA
CTGCGTAATATTATACGAAGAGGAGGGCACCCATTATATAGCACATCCATACAGGCAAAAAAAGATAGTATATATTAGTTGCTCTGTGAGTATGGAACTA
TCTACACAACATACACAACATTCAAACAATCTCTTTGGTAAGCGACAATGAATGAGATACTAGCCTTAATTAAGGTCCTTTCTCGGTAAATCTTAAAGTG
GGGGCAATAAAAAAAGGCATGTGCCAGACGAACTGTAAGAAGAAAATATAAAAGATAATTAATGTCAGGGGAGATAATCTACAGACAAGTTAGCAGAATT
ATATTTTTAGTGTACATAGTGAAAATGTATGTATGATATATTTCGAAAAATATTGTGGGTGATTAGCAACAAAGTTCAAGAGATTTACGTCAATTTCAAA
AGCGCTATCAATTCCTATAAAAAGCATAATATTTAGAAAACATCCACATTTCTATCTTAGCCTAGGCAAACAATGTTGAGACTGTAAACTTCAGTTATCT
ACAAACTTAGTTAGAAGATGAGCAACTTTCAAAACAGTGGACCCTGCCATTTACTTGAAATATCCTAGTTCCTGAATGAGGTGGTACATTCAATATGCAA
GATTAAATCAGGAGAAAACAATGCCATCAACTTATTTTTCGTACAGATCATGGTAATATATAAGTTAATAAAATACATAATTGTCAAAATAAATTATCAT
ATTACAACAACCTTACAGACCAAATCAGGACATGGAAGTCCGAATCATTTGATAATTACAATTTCCAACATCTTTAGGATGCTTAAAGAGCACATTGAAG
ACAACGCACCAAACGAACAGACAAAGGGCCAAACTATACTGGACTGAACCCACCATCTAGCTAGTTATAGAACATTACATGCCCAGATGTTAAAGATACT
ACTAGAGAAACAAGTTGGGCCAACTAATTAGAGATCAGATAGTGCTACTGATAACTCTTCCACAGTTCATAAAGCATAGATTTCTACTCACAAGAACATT
TAATAGATGGTTTTATAATGGCACACTTTACACTCAACCATCGAATTTACTTCTCAGAGCAGGAAAGCAAATTCAGTTCCATCAATTTTCTTGAAACAAA
TCTTCAAATTATTTTCACCATTAGTCAAAAGATTCCAGCATCACCTTCATAACCTTGTATATTGTTCAAAGGAAGTAACTGCCAAAAGAATCATCTACCA
TAGAAACTTTAGGATGGGCCTTTTAGCTACTACATAACCATCTCCATCTTAACTGATAAATTAGCTTTCCGGAAGTAAACAAGTTAACATCAAAATTCTG
TGAGAACTATGACCATGTTTAAATGTTCTGACAAGATTGACTGATCCATGAACCATAGCAGGATTTGACTTAACAGCAAAGTACCAAGCAGATAAATTTC
CTCCAAATAACATCATTCACTTGTTAGTTTTGATGACAAAAGAAGTAGCACCAGTCTTGAATGGAATGGAGAAACCATCTTATACACCAATGTCTAATCC
TAGCCATGACCAATTCATACCACAGGCTTCAGTTTCTCTGGTTTCAATATGCCAAAAATGTTCATAATGCAGATTAAGTGGTCGGACAATCGCTTCTAAT
GGAAGCAAACCAACTACACAATATTAACATATTGAAAATTCAATTAATTGCAATTAGTCATAACCCTAAACCAAAGCATTAAGGTTCCTACAAACTAACA
CCAGTGAACATGAAAATAACGGGATTTGTACCTCAAACTGAACAGGTCAAGCAGCAAGTAATCTGTAGTTCCTGTACTACGATAAAAATAATCCACAGGG
AAGGCAGTCAAAAAGAGCTCCTTAAATCCTCGTGAAAGAAATCCTGAAGTTAAACTTTAACTAAGAACTGACACAGAAGAATCATTCCAACGCCCTAGTT
TAACTTAAACTTTAGCACATATTGCCAATTTTTAAATTCCAAAAAGCAATACATGACGCCGTTTAGAATTTCGATAACACTCAACCATCTTCAAATAATC
TTTAGTCTTGTCGGAATTAAGCAAATTAACATCAGTTTAGTCTTGTCGGAATTGAACAAATTAACATCGGTGATTTGAAAGCTCTGAGCAGACCCAAGAA
AACCACCTCCCATCATGTTTAAATGTTCTGATATGACTTACCTTCCCATAAAATTACCAGACCTGAAGGAAAAACCGCAGAGCGCAGAATTGCAAGCAAC
CGAATTGTCACTAACTACAAGCATCACAACCTTGAAATGAACAGAAGTATAATCTTAGCCCAGTGAGCAATCCTAACCATGACAATTTCAGAGCACAAAC
TTCATTTTATCTAGGCTTGATCATACCCAAAATATCCACGGTACAGCTTAATTGAGCTGACAATCCATCTCACCGAACAGAAACTGAAGCAAACCAACCG
ACCTCGCAATCTTAAATAGCAAATCACAATTAGCCATAAACCAATCGAAAGAAGGGCCGTTCAGAGAACTAACGCAACAGCAAGAGACGAATCGCCCAAA
CTAGACCCCCAAACCGAACGGATCAAGCAGTCGCCTAAACTAGAAACCGGACCGAACCGATCAAAGCACCACCTGATGATCAATCAACAAAAGGGCAGCG
AACGAGGTGAGATCGAAACCGATGGATTCCTTTACCTACCG