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Detailed information on CNT30578141

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30555377	Oryza barthii	Oryza glaberrima	91.3	84.14	100	451	forward
CNT30597137	Oryza barthii	Oryza meridionalis	95.55	96.52	90.89	472	forward
CNT30104172	Oryza barthii	Oryza rufipogon	75.51	99.47	92.49	373	forward

Expression of CNT30578141

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MAATKRMDYSITAVFMLLLIISSTFSSCYAAKDMKDREAILRRHREECKKICRDRRTYCPPEMPCCCVMNAPASSPVSVENESGDGFVIN*

>peptide 2 (31 aa)
EQRGTTMSTVKLKRADTYKQELRACFFSDLS*

Sequence

>CNT30578141
GAGCAAAGGGGCACAACAATGAGCACAGTGAAACTGAAGAGGGCAGATACATACAAACAAGAGCTCAGAGCTTGTTTCTTCAGTGATCTCTCCTAATGGC
AGCTACTAAGAGGATGGATTACTCCATCACGGCGGTTTTCATGCTTCTTTTGATCATCTCTTCCACCTTCTCATCCTGCTACGCTGCTAAAGATATGAAG
GACCGAGAAGCAATATTACGGCGCCATCGTGAAGAGTGCAAGAAAATATGCAGAGACCGTCGTACCTACTGCCCGCCTGAGATGCCATGCTGCTGTGTGA
TGAACGCCCCGGCATCATCTCCCGTTAGTGTCGAGAATGAAAGCGGAGATGGGTTTGTAATTAATTAAATTGATCATCTCCCATCCAAATTTGTAATGGA
TCGATTTGTTAGTTTGATGCTATCTTAGTGTAAACATTCATGCTTTTGTTATATTATGAACGTGGTTATATATTACTCCATGGTTTCAAACAAG