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Detailed information on CNT30578133


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006488, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695146Oryza barthiiOryza sativa39.6639.3691.62370forward
CNT30551995Oryza barthiiOryza glaberrima40.0925.2788.24374forward
CNT30106115Oryza barthiiOryza longistaminata40.340.0487.23376forward

Expression of CNT30578133

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVFIIPLLYFCLFIHIYSPLIIYNVLLST*

>peptide 2 (29 aa)
MRDRNPGRSRMNFRGTKPKLGVPTVCIYV*

Sequence

>CNT30578133
TTTGGGGTGAACTTGCGTAAGGAGTTTGGGCGGCAGTGTTTCACAACAGTGGGATTCATGAAAGTGTGACGATATAGATACCTTGCCTAGGCCTGGCAAG
AGTTCGACCACTATGATGAACCAAGACCCCACTGTGCAGTAACTAGTAGTAAGTGGGACCTTCGAACGGCTCTGGTGTCCTCAGCCTTGCAAACTGTTGA
CATCGTGTGGGTAAAGCTGGACAGTCTCTGCAGAGGTGAATTAAATCATTCGAATGTGCCGTACTCCCGGTTCTGCAGTTGTGTCATCAGGGTGATTCCT
ACTCCTGAAGTATAAGTAGTTTTAAAATTAAAGAGTTGAGGATAAAGATGATTTATGGTTTTTATTATTCCTTTACTTTATTTTTGTTTATTTATTCATA
TCTACTCACCTTTAATTATTTATAATGTCTTGTTGAGTACATAAGTACTCACATAAGTACTCACCCTTGCATAATTTGACATATAGAGGAAACGTGCTAA
CAAGGAGATAGGAAGGAAGCGAGATTTTACGGCAACGACAAGTTTACCTAGGCTAGTCTACACTTGAGCTTTTGCTTGTGGAGTTCTTTGAATTCTTTGG
AGTTTATTAGCTGTAGTTTTAGTAGTTGAAGAGCTTAGGAGTTAGTAGTTTAGCACTTTAGATTTTTCTTGTATTTTCAAATAAGGATATTTTAGTTTGG
ATCTTTTCAACCTTTAACAATTGTATAATTAGCTTGTATAACCAAATTTGTATAATTAATCGAAAGCTGATCTGTATATCAATCTATGCGTGATCGAAAT
CCTGGACGATCACGAATGAATTTTCGGGGCACCAAGCCTAAATTGGGTGTCCCCACAGTGTGTATATATGTTTAAATTCATTATCATCAATATGAATATG
GGAAATGTTAGAATGACTTACATTGTGAAACGG