Detailed information on CNT30578094


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692617Oryza barthiiOryza sativa33.039.1185.45110reverse complement
CNT30552106Oryza barthiiOryza glaberrima28.838.8687.596reverse complement
CNT3099852Oryza barthiiOryza rufipogon33.3312.0390.99111forward
CNT30116369Oryza barthiiOryza nivara32.139.6886.92107reverse complement

Expression of CNT30578094

Peptides detected in this lncRNA

>peptide 1 (52 aa)
VTCFFFFSFFARLINLYKRQRVVDLQLCGEERFERMVSYEKSKIMIKLIFFF*

Sequence

>CNT30578094
TGTAACCTGTTTCTTTTTTTTTTCATTTTTTGCGAGATTAATTAATCTGTATAAGAGGCAGAGAGTTGTTGACTTGCAATTATGTGGAGAGGAGAGATTC
GAGAGAATGGTTAGCTATGAAAAATCTAAAATTATGATCAAACTCATTTTTTTTTTCTGAGATTAGAGTGTGGCCATTTTGATTTGTTTGAAATTCCAGT
TAGTTTTGGGCCGAATCTAACAAGGAAAAAGTGTACCGAAGGTCCCTCAACTTGTTAGCGGTATACAAAAACGTCCTCAAACCGCAAACCAGATATGCAG
GGTCCTTTAACTGTACAAAACCGGTCACCCGAG