Detailed information on CNT30578082


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002948, E-value = 3e-109

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3015666Oryza barthiiZea mays24.153.3588.68106forward

Expression of CNT30578082

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MGDRPGNSSRVHTSEDKVCRKDMCWSVRAVYNL*

Sequence

>CNT30578082
TAAAAAGTTTGCTGGAGGATACCTTGAACTCAATTGAAGAGGAAATTTTTTAAAAAAACGACGAGAATGCCTCTAGCACCATATGCTTTAAACATGGCGT
TAGAGTAAAAGTTTAGAAATTAAGCAACTCTAAATTAACCCTCACCCAAGTATATCACTGTAACATCCTGGCCTAGGGCTTAATAGGATTAATAGAATAC
TCATATCAACAAGTTGNAANTTCTTTTCCNNNAGCCNATNTCCAAAGAACTCCANGGTTAAGCNTGCTTGGCCTGGAGCAATTTGGGATGGGTGACCGAC
CGGGAAATTCTTCCCGGGTGCACACGAGTGAGGACAAAGTGTGCAGAAAAGACATGTGTTGGTCTGTGAGGGCAGTCTATAACCTATGAAAGCTGCCAGA
TGTAAGTGGGCCCGGCCTGGGAGAGGCGGGTCGTTACAA