Detailed information on CNT30577917


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000180, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30117748Oryza barthiiOryza nivara36.9810099.46368forward

Expression of CNT30577917

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MFLFSSVLNRFKFHSFQAAEQIHGREDYRRLSGLTGYPGGSVELRIPNSYLESVTVCHWCWWCQSS*

>peptide 2 (58 aa)
MHLNVCFCSLQCLIDLNFILFRLRSRSMDVRITEDCQVSLGIQVALSNCGFQIVIWSL*

>peptide 3 (33 aa)
MATNSFPHENLPLIPDLWCESEVARSPSWLQII*

Sequence

>CNT30577917
CTTGACCAAGTACCTACTGATAGGTACTCTAGTAGGGTACACTACAATTAGGCCTCTCGAGAGCTGGGAATAGTAATGTGCAACAATTAGGAATCACCAG
AGCTGGAAATTCCAATGCTTATGATTATACTGAGGTACATTTCCAATGCGTTAGCTTGCCTCTTCTTTGCAAATGGCCCTCGCCTGATATGTTTCCATTA
GAAACATGAAACCATATATATGACTGTTGCATTATGTCTATTTTCTTCCATGATGGTTCAGACGTCTGAAAAAAGGACAAAAATATTCTAGAATATGTCA
TGGTGGTCCAAATATATCCTTCTGTCTTGTGCCCACTCTAATATCTATCATTGGTAACACTATTCAATTGTTACCATGTTGTTGCAAACCCTAGATTCAG
TTATTCAGCTGTTCTCTGCTGCTGTTGCTTACCAGTTTTCTTAGTTGGGTGTTGATCTTTTCTCATTTTTTATTTCCTTGTTTCCTGGTACACCTGATGC
CTCTCTGATGCATCTGAATGTATGTTTTTGTTCTCTTCAGTGCTTAATAGATTTAAATTTCATTCTTTTCAGGCTGCGGAGCAGATCCATGGACGTGAGG
ATTACCGAAGACTGTCAGGTCTCACTGGGTATCCAGGTGGCTCTGTCGAATTGCGGATTCCAAATAGTTATCTGGAGTCTGTGACTGTCTGTCATTGGTG
TTGGTGGTGTCAATCTAGCTGAGATCCGTCTGGTATAGCGTATGCGAAACATCATGCACTATCCCCAGTCTTAACCATGCCCCAATGGCCACCAATAGTT
TTCCTCATGAAAATCTCCCCTTGATCCCGGATCTGTGGTGCGAGAGTGAAGTTGCACGAAGCCCATCCTGGTTACAAATTATTTAATAATTAAACATGTT
ACAAATTAAAGAAGAAATAAAAAAACATCAAAAATTATAAAATGTCAAAAAAATCAATGCACACGACTAGTGTGCTTAGCAATTTTTTTATCCAC