Detailed information on CNT30577908


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696646Oryza barthiiOryza sativa45.8325.7597.4154forward

Expression of CNT30577908

Peptides detected in this lncRNA

>peptide 1 (46 aa)
DGTLIFWQAHEQILLTYTCNHSHKSTSEHSYYIILVVRQDTTIQVW*

Sequence

>CNT30577908
GATGGAACTCTAATATTTTGGCAAGCACATGAACAAATTCTACTCACATATACGTGCAACCACTCTCATAAATCTACCTCTGAACATTCGTATTATATTA
TTCTGGTTGTAAGACAAGATACAACTATCCAGGTCTGGTAACTAATATTTATTCTTTGCTCTACATCTTAGATTTCTGCTAGATTTTCTCTTATTTGATT
CTACAATGAGCTGCAGTTGCAGCCATTTGAGCTGTTCGCAGCATCACTAATTAGGCTGAGAACTCAAACAGCATAGTGTGCTTATACTTCTCACCAGGCT
GCACCACCACGGAGGGGAAATTGGGTTGGTTGATGG