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Detailed information on CNT30577845


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3058565Oryza barthiiAmborella trichopoda7.5820.0789.4757reverse complement

Expression of CNT30577845

Peptides detected in this lncRNA

>peptide 1 (42 aa)
NISIRLFVVKICLEERTRKAGNSGTKKELLGEESLPFRFIRR*

Sequence

>CNT30577845
GAAATATCTCTATCCGGTTATTTGTAGTGAAAATCTGTCTCGAGGAGAGAACGAGGAAAGCAGGGAATAGCGGAACAAAGAAAGAACTCTTAGGGGAGGA
AAGCTTGCCTTTCCGATTTATTCGCAGGTAAATTCGGAGTTACACGAAGTGGAAGGACCAAGGGCGAAGCGAAAGAGGGCATTTGCGTTCCGGGGAGGGC
GTCGCGTAGGCATAGTTCCAATGGTAAGCTGATTCCAGGTACGCCCGTTCCTCTACATCGTTTGACTATCAAAGTCAGGTCAAATGTAGGTGAGTGTTGC
GACTCAGTAGCCGTGTCTTGGTAGCAACCACCAAACCAATAGAACAAAGGTTAGCTCTGCAGCTAGTCCACAAGCAAGGGTTGTAGGTCCATTACCGTCC
GGCTCCCGACCGAAACTAACGGAGTCATCCCAACTCTCGGATCGGAGATGCTAACGGGACAGGAATCGAAGTCCATATTTTTCTAAATTCTTAAATGAGA
GAGTGAATACCATACCTAATTCAGATTTGGCTCGCTTAGAACTTGATAGTCTTCTAATGGCTAAATTGGATGAAGATAATCAAGCCAAGCTCATTTACTT
TGAATTGAGGAAGGAAGGGGTAGGGGAATACTAAATTTCTTAAGATTTTTTTGTAGGTTTCTCATAGCAAATAGAGACACCGAGGCCCTCTCCACAACCT
AGTAGTTGATGGGTATGGGGAGGGGAGAGAAGAGTGGGCGAGGGGAGGGGAG