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Detailed information on CNT30577841


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370291Oryza barthiiOryza glumipatula26.159.7486.7668forward
CNT30107966Oryza barthiiOryza longistaminata26.159.7386.7668forward
CNT30101869Oryza barthiiOryza rufipogon26.159.886.7668forward

Expression of CNT30577841

Peptides detected in this lncRNA

>peptide 1 (85 aa)
SRVPEQRPTSMRGTPSSATGESSCSPRVRESCSCSPTVLLSKRRRLKISKRRRLKMRIFSSNACFGDLDQNMPKGGLDLFSFCEPK

Sequence

>CNT30577841
CTAGCCGAGTCCCGGAGCAACGACCGACGTCGATGAGAGGGACGCCAAGCTCGGCCACCGGGGAGAGCTCCTGTTCGCCGAGGGTGAGAGAGAGCTGCTC
CTGCAGTCCTACTGTTCTACTAAGCAAGAGAAGAAGGTTGAAGATAAGCAAGAGAAGAAGGTTGAAGATGAGGATATTTTCGTCAAATGCATGTTTTGGT
GATCTAGACCAAAATATGCCGAAAGGTGGGCTGGATCTGTTTTCATTTTGTGAGCCCAAG