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Detailed information on CNT30577796

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30555049	Oryza barthii	Oryza glaberrima	100	42.02	99.6	495	forward

Expression of CNT30577796

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MAWTKKPNMENMARRXFLISFTLSSANASGSSARPSGSK

>peptide 2 (39 aa)
HIYTIHSQKWLYFGIEGVFVSDLIEMRNPLIRITPRIST*

Sequence

>CNT30577796
CATATTTACACTATACATAGCCAGAAATGGTTATATTTTGGGATCGAGGGAGTATTTGTTTCTGATCTAATAGAGATGAGAAATCCGCTAATCAGAATAA
CACCACGGATAAGTACCTAGACCATTAGTTGGGAAACAAATAAAATCATTATTGCAAAAACATCATCTTCTTCATCATCTTCTTAGTGTACACAACACCA
ACTCGATCATCATCTCGTCGCACTAAACCCATCTTCCCCAACCCAAAGACAACGAACTCGCTGGCCACAAATCCATCCAACCACAATTAACCACTGCTAA
GCTACGGTGCCCCACTTCACTTGCCGGGGACGAAGTTGGTGGTCGGCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGA
ACATGGAGAACATGGCGAGGCGGCCNTTCTTGATCTCCTTCACCTTGAGCTCCGCGAACGCCTCGGGGTCGTCGGCGAGGCCGAGCGGGTCGAAG