Detailed information on CNT30577789


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554805Oryza barthiiOryza glaberrima10054.5799.73370forward

Expression of CNT30577789

Peptides detected in this lncRNA

>peptide 1 (46 aa)
VKVVRNFLPKKNQGNNASKNQDTGKVTRRLQAVLSTSIQEINRDLL*

Sequence

>CNT30577789
GTCAAAGTAGTACGTAATTTTTTGCCAAAAAAAAATCAAGGTAATAATGCATCCAAAAACCAAGATACAGGCAAGGTCACGAGGAGACTGCAGGCGGTGC
TTAGTACTAGTATCCAAGAAATAAACAGGGACTTGCTATGACACGGATCGAAATAAGAACCCGACACGGTACAAACTTTCGAGCTCGTCGCGAGTAGTAA
TCTATTCATACCTACACGGCTACACCTGGCTAGCTGCATGCTCTTTTATTCAGTACAGTACGAACCATTCTGACGAATCCTATGTAGGAGTATCACAAAA
CGACGACGAAACCACAGTTCATGCACACACACAGTACACAGAACAGAGCGAGCGAGGCCGGGGTTGCTAA