Detailed information on CNT30577787


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8LDU5|PP298_ARATH, E-value = 2e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
nothing found

Expression of CNT30577787

Peptides detected in this lncRNA

>peptide 1 (79 aa)
AQHPLITECNTEKCGRNPLPNISSRYASALSYNPFTHNPFTTAVYVTAFGAHPLSLISPNTLQASSGRPSRHTPTMTVL*

>peptide 2 (42 aa)
MPLWSISSSRLAAVRTWPLRHSDWVRMRYVSALGDTWRERRR*

>peptide 3 (30 aa)
MSRLCEARTSGSGRGRRVETSRRRCSAHGK*

>peptide 4 (50 aa)
MPLPCHIIHSHTTHSPPQYMSPHLARTHSPSYLRTPCRHPVAVPHDTLRR*

>peptide 5 (66 aa)
MPGGQQGCPCGAFRRAGWLQCGPGPCGIVTGSGCGMSRRWETHGGSGGDERGRLTRRGGRSGRRLR*

Sequence

>CNT30577787
GCACAGCATCCCTTAATCACTGAATGTAACACAGAGAAATGTGGTCGTAACCCTTTGCCCAACATATCATCAAGGTATGCCTCTGCCTTGTCATATAATC
CATTCACACACAACCCATTCACCACCGCAGTATATGTCACCGCATTTGGCGCGCACCCACTCTCCCTCATATCTCCGAACACCTTGCAGGCATCCAGTGG
CCGTCCCTCACGACACACTCCGACGATGACCGTGTTGTAATGTACAATGTCAGGTGAGACCTCACGGCCTCGCATGAGGCACAGCAAGCGGTAAGCCTCT
CGAAGCTGCTTCTTACGGCAGAGCGCGTTCAGCACGGTGGTGTATGCCAGGGGGTCAGCAGGGATGCCCCTGTGGAGCATTTCGTCGAGCAGGTTGGCTG
CAGTGCGGACCTGGCCCCTGCGGCATAGTGACTGGGTCAGGATGCGGTATGTCTCGGCGTTGGGAGACACATGGAGGGAGCGGAGGCGATGAAAGAGGGA
GATTGACACGGCGAGGTGGCCGGAGCGGGCGGCGGCTTCGATGAGCAGGTTGTGCGAGGCGAGGACGAGCGGCTCGGGGAGGGGAAGGCGGGTGGAGACG
TCGCGGAGGAGGTGCAGCGCGCACGGGAAGTAGGAAGCGGTGGAGGAGAGAACGGAGAGGAGGCGGAGGAGAAGCTCGGGGTGGAGCGGCAACGGGCTGG
GGCCGGAGACGAAGAGGGAGTTGAAGGTGGAGAGGAAGAGGTGAGGCTGCCGGCGGAGGCGGAGCGCGGAGAGGAGCAGC