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Detailed information on CNT30577708


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003714, E-value = 3e-119

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103484Oryza barthiiOryza rufipogon46.3650.5298.98293forward

Expression of CNT30577708

Peptides detected in this lncRNA

>peptide 1 (91 aa)
NKRATLLQPTLAATTPSVLRPCRCRCRPGCCCRLCAAATAIAGGRSRRHPSQPAFPFRFPSSREKGTERVYRRKKERKSRATLRNFSDFXN*

Sequence

>CNT30577708
AAATAAAAGGGCAACGCTCCTGCAGCCAACCCTAGCCGCCACCACGCCTTCCGTCCTGCGCCCTTGCCGCTGCCGCTGTCGACCCGGTTGCTGTTGCCGT
CTTTGTGCCGCCGCCACGGCCATAGCTGGAGGCCGCAGCCGTCGTCATCCATCACAACCGGCGTTTCCTTTCCGTTTTCCTTCTTCCCGAGAGAAGGGTA
CCGAGAGGGTGTACAGGAGGAAGAAGGAAAGGAAAAGCAGAGCAACGTTGAGGAATTTCAGCGATTTCGNAAATTAGGGAAATTTGTCGCAAGTGGTGCC
TCTCAACAACTCAGCCAAATGGAGCACCTTACCAAGCTCTTACGAGTGTCTTACCAACAATGCTAAGGACGGCATAACTGGTGGCTGGTTCATGACACAT
TGAAGGACATGATGTGGCGATTGCAAGGATTAAAGTGGTGCTGGCCAGAAGTATATATATGAAGCTTGAGAAGCACAATATATAGTAGCAAAGGAATGCA
ATTGTGCTAATCAAAAAATGCAAGGTTGAATAATAGTTCAAAGTACAAGTCAATGTATTGGCCTAGCTTAGACTCAATTCTAGCTCAAGCAAGCACCCGA
CAACACTAACGACTAGATATGAATCAATGTAC