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Detailed information on CNT30577660


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696108Oryza barthiiOryza sativa84.1825.5698.5399forward
CNT30117556Oryza barthiiOryza nivara84.1823.4298.25399forward
CNT30604553Oryza barthiiOryza punctata79.5425.1788.06377forward

Expression of CNT30577660

Peptides detected in this lncRNA

>peptide 1 (61 aa)
FGIFFSDTKTVVTKICLVPNPKSRTGRKEGEIDSHSKKTDGFLVVDLASEVWKKNPSWLPT*

Sequence

>CNT30577660
TTTGGGATTTTTTTTTCTGATACTAAAACAGTAGTAACAAAGATTTGCCTGGTTCCGAATCCAAAATCAAGAACAGGCAGGAAGGAGGGAGAAATCGACA
GCCACAGTAAAAAAACAGATGGCTTTTTGGTGGTAGATCTAGCAAGTGAGGTGTGGAAAAAGAACCCCTCTTGGCTACCAACCTAACACTAGAACAACAC
AAAGAAGATGAAAGAAAAACAGCAGATCTGGGAGCCCTGGATCTAAAAGGCCCTGGGTCTCTCGCTCTCTGCAAGCAACCTAACCAAGAAACCGTAGAAG
AACAGGTGGGGGAGCCAGAGGAGGAAGAAGAAGAGGGTTTCGAGAAAACTTTACCTTGAAGACGCTCGAAGTCGCTCAGATCTAAAGCTTTTCTTACCTC
GCTCGAGCTCACGGTGGCTGTGGGTGTTCGTGGGCTTGGAGATGGTGGCGGCGGGGTGTGTGTGTGGGCGAAAG