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Detailed information on CNT30577654


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30107803Oryza barthiiOryza longistaminata65.133.1898.63291forward

Expression of CNT30577654

Peptides detected in this lncRNA

>peptide 1 (61 aa)
FGIFFSDTKTVVTKICLVPNPKSRTGRKEGEIDSHSKKTDGFLVVDLASEVWKKNPSWLPT*

Sequence

>CNT30577654
TTTGGGATTTTTTTTTCTGATACTAAAACAGTAGTAACAAAGATTTGCCTGGTTCCGAATCCAAAATCAAGAACAGGCAGGAAGGAGGGAGAAATCGACA
GCCACAGTAAAAAAACAGATGGCTTTTTGGTGGTAGATCTAGCAAGTGAGGTGTGGAAAAAGAACCCCTCTTGGCTACCAACCTAACACTAGAACAACAC
AAAGAAGATGAAAGAAAAACAGCAGATCTGGGAGCCCTGGATCTAAAAGGCCCTGGGTCTCTCGCTCTCTGCAAGCAACCTAACCAAGAAACCGAGGAAG
AAGAAGAGGGTTTCGAGAAAACTTTACCTTGAAGACGCTCGAAGTCGCTCAGATCTAAAGCTTTTCTTACCTCGCTCGAGCTCACGGTGGCTGTGGGTGT
TCGTGGGCTTGGAGATGGTGGCGGCGGGGTGTGTGTGTGGGCGAAAG