CANTATAdb - search

Detailed information on CNT30577545

BLAST search results

BLAST vs Swiss-Prot:
sp|Q0JMB2|RSLE4_ORYSJ, E-value = 4e-21

BLAST vs NONCODE:
NONORUT006644, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
nothing found

Expression of CNT30577545

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNQAAKLKSFVFAAPYWFQPLQDSSLDVGVSGWFLL*

>peptide 2 (33 aa)
MKLPYPLIAVVSLLKASPEDPNLELLPLTPSWH*

>peptide 3 (32 aa)
WRVCHVTRPHRFLSPNSEMHKIIKGIYHTRDS*

Sequence

>CNT30577545
CTGGAGGGTTTGTCATGTAACGAGACCACATCGATTTCTTTCCCCAAACAGTGAAATGCATAAGATCATCAAGGGCATCTACCATACAAGGGATAGTTAA
TAGCTTGCATTTGGCAACAAGGTATTTCCTTCCTGTAAGGTCATCCTCCAAGTGTAATGAAGCTTCCTTATCCTCTGATCGCTGTAGTGTCACTCCTAAA
AGCTTCTCCTGAAGACCCCAATCTTGAACTACTTCCTTTAACACCATCTTGGCATTAACAATGTTGGATTTCCAGCGAGGGAACAAACCTAACATATAAG
AGCCAACATGTTTTGGAGAACATCTTATTGTTTTTCTGTTGATCTTCCAGTCTTCGTCAATAAAATGCACTGTTAAACAAATAATATGTAATTCAACATC
AAAGTCCCAATACCATGAATCAAGTGACAGGTAAACTCCGCCAGGTGTGGCTGTTATTTTCTCCTTCAGCTTCTGTTTTTCTTTCTCATAGACACTAAGA
AACTTTTCTTCAAGAGTAGTTTGTGGCATCATATTAAGAACTGGATTTCTACCAGCTAGAAATGGCGCAAAGCTTGCACCGTACATGGCAGAGAAGGGGC
CAAGTTTTGAGACTATAGCCCTCATAAACTCTTCAAGAGGATTTACCTGACCATATTTCAAGTCCTTCGAAACAGATGAATCAGGCTGCAAAGTTGAAAT
CTTTTGTTTTTGCTGCACCCTACTGGTTCCAGCCTTTGCAGGACAGCTCTTTAGATGTCGGCGTAAGTGGCTGGTTCCTTTTGTAGTTTCTCCAACGAGA
CAGTTTTTACAATGATTACATATGGCACTTTGAACCTTCCCATCAATTAAGACAGCTTTAAATTCCTCCCACACCTTGGACCTAAATCGTCGTTTTTT