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Detailed information on CNT30577513


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000305, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692496Oryza barthiiOryza sativa55.618.0996.05228reverse complement
CNT30101780Oryza barthiiOryza rufipogon35.1247.0697.92144reverse complement

Expression of CNT30577513

Peptides detected in this lncRNA

>peptide 1 (60 aa)
GRGVNKAIQNMPPKILIKLDFSKSLLEPWLLEKPDLEKKREGIPETRRGREKEFPKLEER*

Sequence

>CNT30577513
GGGGGAGGGGGGTGAATAAAGCAATTCAAAACATGCCCCCGAAAATACTCATCAAGCTGGATTTCTCAAAATCCTTACTTGAACCGTGGCTATTAGAGAA
GCCGGATCTAGAAAAGAAGAGAGAAGGAATTCCCGAAACTAGAAGAGGAAGAGAAAAGGAATTCCCGAAACTAGAAGAGAGGTGAGGAGGAGATAGCAAA
AACTCGTCATCGCAAAGTTCAAATTGCAAGCAGAATTTAAATTGCGGAATGTAAATGAACAAGGAAAAAACGAAATCCTTCAAATCATTTCATTCATAGG
TGATGCAAAATAACCGCTCAACTAGGAGCAAACATACACCTTCAGAGGAACATTAACACAAACTTAAAATCTCTCGGACAAACACACTCCAAACTAATCC
TAATACAAAA