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Detailed information on CNT30577376


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099647Oryza barthiiOryza rufipogon19.1332.6482.98141reverse complement
CNT30115673Oryza barthiiOryza nivara19.2725.0484.51142forward

Expression of CNT30577376

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MRTFPKFINDGDFCKKKKNFLYINCLEYSL*

>peptide 2 (62 aa)
MASGLRHIHGRDAAAGRRCRCASLTSFCCCCCSHSDSEVSPPHRPATHSNNNSAMRPLYLKIK

Sequence

>CNT30577376
GTAGTTTTGTGATAATTAGTCTTAAACCTGTAGTTTTATGATAAATTTGTTGCTAAATCTGTAGTTCTGTGATATATAACCTTAAATCTGTAGTTTTGTG
ATAATTTGGTTAAAATATATATAGTTTTGTGAAATTTACTCATTTTTTTTACCAAGTTTTGATAGGGCAGCAAATCAAAGTTGCCTCGTTCTTTTTCTCT
TACAAATTAGTATGTATTATTATGAGAACATTTCCCAAGTTCATAAATGATGGCGATTTTTGCAAAAAGAAAAAAAACTTTCTATATATAAATTGCTTAG
AATACTCCCTTTAAAACAAAAATTCAACTATGTAAGTACTAATTCATTTATTTCTACCCTCAAATATTATAAAAGAAATACATAAACCTTTGATTTTATT
CCCCCATTCTGATTCAGCCTTTCAAACTGGGCCTTATGGCCTCTCTATAGCCTACTCCAAAATCACTATCTGTCGCAGGCGTACGTTGGCAGTTTGGCAC
GGCTGGTCGGCTGGTTGACCCAACAGCACATCCACGGGACACCCAGTGATGGCGTCCGGGCTTCGCCATATACACGGACGAGACGCTGCCGCCGGTCGCC
GTTGCCGCTGCGCCTCTCTGACGAGCTTCTGCTGCTGCTGCTGTTCCCACTCCGACAGCGAGGTCTCACCGCCTCACCGCCCGGCAACACACAGCAACAA
CAACAGCGCAATGCGTCCTCTCTATCTTAAAATAAAA