Detailed information on CNT30577299


BLAST search results

BLAST vs Swiss-Prot:
sp|P10978|POLX_TOBAC, E-value = 1e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30464702Oryza barthiiSaccharum spontaneum13.9228.8287.8866forward

Expression of CNT30577299

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MQKEHPSIARIIINNHKTMTITTNALIGCWAKQIHMQELQWFRCGHDTLSRMRTCNLLAGLTSTTKLILLKLHIFQAHN*

Sequence

>CNT30577299
GTACGATTTTTCCTCTCCACTACACCATTTTGTTGAGGTGAGTAGGTAGCGGAAAGTTCGTGTTTAATACCAAGATCATCACAATAGTCCTCGATATTGG
TATTCTTAAACTCGGAACCATTGTCACTTCTAATTTTCACAAGAGTGCAACTAAATTCATTTTGGGCCCTTTTTGCAAACTTTTTGAAAAGCTCGGCAAC
AATAGACTTATCATGCAAAAAGAACACCCAAGTATAGCGAGAATAATCATCAACAATCACAAGACAATGACTATTACCACCAATGCTCTTATAGGTTGTT
GGGCCAAACAAATCCATATGCAAGAGCTCCAATGGTTTAGATGTGGACATGATACTCTTAGTAGGATGAGAACATGCAACTTGCTTGCCGGCTTGACAAG
CACTACAAAGCTTATCCTTCTTAAACTTCACATCTTTCAAGCCCACAACTAGATCACGTTTTGAAAGTTTGCTC