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Detailed information on CNT30577202


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695136Oryza barthiiOryza sativa92.64100.2899.441070forward

Expression of CNT30577202

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MPARLRVVGNQETADTRAPVNPMMSQQQLRLLRMRSSLYLYYSPDRAGA*

>peptide 2 (34 aa)
MISSLRGTKCTLPFLKLRVRFLLKEYTEFCMYKA*

Sequence

>CNT30577202
AAATTTGCTAAAGAGTGAGACTGTGAGAGAGACGGGCTGCCTTTAGTTTCACTGTGTCTCCATGATCTCTGCGATGTGACCGCTCGCAGGTCGCAGAGCC
CCCGCTCTGGCCTCTGCAAGGAGCACGCTTCTAAGAAGAACAATGCTGTGGCATACGCAAAGTCCACACAGGTGATACTAGTTGGGTATCCTCCAAGGAG
GACAACGGTGGCCCAGGTGAACGCCAGTGTGCCGAGGGCGTTGCCCACCCTCTCAACGGAGGCAACAACTCGAACAAAGCAATTCAGCTGCTCTTCTGGC
ATCGCGCTATGCCAGCTCGCCTCAGGGTTGTAGGCAATCAGGAGACAGCTGACACGAGAGCACCGGTTAATCCAATGATGAGTCAGCAGCAACTTCGATT
ACTACGCATGCGAAGTTCCCTTTATTTGTATTATTCTCCCGATAGAGCTGGAGCATAGTTTTCTTGACTGACATGCCAATGTTCATCTTCTAGGAAAATG
TCACAGCTGATGGCATCTTCCTCTCTATCTACCTAAGAGTTGTACGCATTACAGAAAAAAAACAAACGGAAGAGAGTAAACTCCAAACTCCAGAGGTGTT
GTTGGATTTGGTGATTGGTCATTGGTTGCGGCGGCGCCGCCGGCCTACCGGGCGTGGAACACCGTACGGCCGGAGAATGATTTCCTCGTTGCGCGGCACG
AAATGTACTCTTCCATTCCTGAAGCTACGGGTACGGTTTCTGCTTAAAGAATACACTGAATTCTGCATGTATAAAGCCTGAACCCGTAGGTCTTCAGCTA
CCCGGCAGTGTTCAGATAAGCAACCCGGATGATTGTTTTGGCTTCTGGATTTATCAAATGAAGTCATTTTGCCTGTTGACTCAGACATAGGATTGCTTGA
CGTACCCATGATCAAGTAACATGTATATATAAAATCCGACAAATGTTATGTGATCTAGTCTAAGAGAATGGTTGAATGAAGAGGATCCTCTTAATTTGGA
GATTAAAAACAAGTTGATTGAGATGCAATCTGAGTGTACGAGAAGCAGTTATAGAGTTGGCAATGGTATGTAAACCTCTGAAAATGACTGTTGCGTGAAA
CGGTGAAAGGTTGTCTATAAAGATTTTATTTACTGATTATTGAAATGGATTATGG