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Detailed information on CNT30577188


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067805Oryza barthiiLeersia perrieri26.3954.5585.29204forward
CNT30596571Oryza barthiiOryza meridionalis80.2172.9495620forward

Expression of CNT30577188

Peptides detected in this lncRNA

>peptide 1 (35 aa)
DTFSFYSWYICTHIHNTRAYICFIIRSTPAQMQHH*

>peptide 2 (35 aa)
MLYYKKHACSDATSLRKHIDSHMDTYTSEQHMTNT*

Sequence

>CNT30577188
GGGACACATTCTCTTTTTATTCATGGTATATATGTACGCACATACATAACACACGTGCATATATATGCTTTATTATAAGAAGCACGCCTGCTCAGATGCA
ACATCATTAAGAAAACACATAGATAGCCACATGGACACATACACCAGTGAACAACACATGACAAACACATAGATAGTCACTAGAGCAATACTACATACCA
AAACTATGCGGAATCATACGTAGCAAACAACCAAGTCTACTCAGTTCCCGGGCACAATTACAGCTATTGCTGGTGAAAGAGGTGGTGGCTTTGGCAGAGA
TCGCTCTGGCTGAGGCTTGGGTTCTGGCTTAGGATCAGGCTGTGGCTCCGGCTTAGGATTAGGATTTGGCTTGGGGTTAGGACTTGGCTCAGGTTTAGGT
TCAGGCTTTGGCTCTGGCTTAGGATTTGGGCTTGGCTCCGGTTGTGGCTCAGGCTTTGGATTTGGTTTTGGGTCAGCTTTGGGGCTAGGTTGCGGGTTCG
GTTGAGGATCTTGTTTCGGGTCAGGCTGTGGCGTTGGTTTTGGGTCAGGCTGCGGTGATGGTTTTGGATCTGGCTGTGGGTTAGGTTGAGGGTTAGGCTG
TGGACTGGGTTTTGTCTCTCGTTGTGGTTTTGGTGTTGGGTCAGGTTTAGGCTTGGGATCTGCTGGCTTTGGATCAGATTTAGCTTCAATCACGCGTCCA
TTGGCAATGTCAGGAACATTTGCCGCCAATGCAATGGCAAGCGCCAAATGGAAGCACAGTGAGAGGATTGATC