Detailed information on CNT30577123


BLAST search results

BLAST vs Swiss-Prot:
sp|P24065|PSBB_WHEAT, E-value = 8e-62

BLAST vs NONCODE:
NONBRAT002845, E-value = 2e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30401703Oryza barthiiBeta vulgaris24.830.7487.3795forward
CNT30199419Oryza barthiiPisum sativum91.3831.2587.14350forward
CNT30485866Oryza barthiiOlea europaea30.033.2484.35115forward
CNT3090241Oryza barthiiSolanum tuberosum43.0812.5290.91165forward
CNT30283847Oryza barthiiTriticum aestivum27.947.8396.26107forward
CNT30390502Oryza barthiiTriticum turgidum91.3826.2295.71350forward
CNT30135381Oryza barthiiLolium perenne89.5639.7597.67343forward
CNT30679618Oryza barthiiTriticum urartu88.2545.3794.08338forward
CNT30345947Oryza barthiiEragrostis tef91.3839.5994.29350forward
CNT30175108Oryza barthiiVigna angularis26.1131.2589100forward

Expression of CNT30577123

Peptides detected in this lncRNA

>peptide 1 (32 aa)
KNISEQGSSPMPNVSEKEEQSKGSMTKSKPTP*

Sequence

>CNT30577123
AAAAACATCTCGGAACAAGGTTCTAGCCCCATGCCAAATGTGTCCGAAAAAGAAGAGCAAAGCAAAGGTAGCATGACCAAAAGTAAACCAACCCCTTAGA
CTGCTGCGAAAAACACCATCTGATTTCAAAGTAACCCGATCTAATTCAAAAATTTCCCCTAATTGGGAACGCCTCGCATATATTTTTTTACAGTAGCAGG
ATCAAAATAACTTACTCCATTAAGTTCGCCACCATAGAACTCCACCGTTACGCCTACTTGTTCAACACTATATTTGGATTCTGCTCTTCTAAAAGGAACG
TCCGCTCTCACAATTCCCTCTTCATCTACCAAAACAACCGGAAATGTTTCAAAAAAAGTAGGCATACGAAGTCACCAAACAAA