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Detailed information on CNT30576963


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FIG6|DIR1_ARATH, E-value = 1e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102671Oryza barthiiOryza rufipogon46.0845.3393.73335forward

Expression of CNT30576963

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MSCMYNCSRTALRRAAEAGTTNAAARIYMTARRRRSLADLAILICL*

Sequence

>CNT30576963
GTCCATCATATCTACTCCTATTAATTGCTTGAACATATGCATTTAATTTTGAAACACAAACGAAATAAAATTCGTAGAAAAGCTAGCAAAAGTAGCAAGG
ATTATTAAATTAATTTTACCTGCAGGTTGCAGCATGAGGAGGAGGGGGTGAGGGTGACGTCGTTTAATTGGTAGCAAGAGCAGATGCAGCAGCAGTAGCG
GGCAGTGAGGCGCACACGTCCAGCTCCAGCACATAGTGCGCCCCCTCCAACACCTCCAGCGTCCTCCACAGCACGTGCCCGGACGCTCGCCGGAGCTTCC
CCGTCCCGCCGACCACCGCCAGTTCCCTCACCTCCGCAAGGACCTCGTCGCGGCCGGCGATGACGAGGGTGCTCCCGTTGTAGGGCCCGTGGGTGAGCTT
GAAGGTGGCGGTGACCACGACGACGGGGTCGACGAGGCCGGCGAGGACGTAGGAGCCCTGGGCGCGGCCGACGGGGCTGGACTCGAGGCTGGGGCCCTCG
GTGAGGAGGCCCCGTGCCCTTCACCACCTGCACGGCCGTCACCCCGGCGATGTCGTGCATGTACAACTGCAGCCGCACCGCCCTCCGCCGCGCCGCGGAG
GCCGGCACCACGAACGCGGCGGCGAGGATATATATGACAGCGAGGAGGAGGAGGAGCTTGGCAGACCTGGCCATTTTAATTTGTCTCTGACGACTCTGCC
TGCAGTGCAGCCTGAGCCTGATCGAGG