Detailed information on CNT30576920


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002066, E-value = 2e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691985Oryza barthiiOryza sativa7.7127.4987.5328reverse complement
CNT30670881Oryza barthiiSetaria viridis2.9659.7287.3126forward
CNT30523822Oryza barthiiSetaria italica3.1538.8489.55134forward
CNT30555137Oryza barthiiOryza glaberrima2.4924.7788.68106reverse complement
CNT30109567Oryza barthiiOryza longistaminata3.2735.181.29139forward

Expression of CNT30576920

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MILITSSKAPASTTVHSCFTHSLTETRILSTGLKCTGISGIISRIPGKQAACD*

>peptide 2 (55 aa)
MAARTCRHLAGATRMGKAREWAGNVGVARARRVGAWGGAEEAAAAVGAGAPLAGD*

>peptide 3 (56 aa)
MKRKFRFIPISNKDVLGSYDIPGIEGFRSKQHQIREIGEMKRNLWFSRANHQGQLL*

>peptide 4 (63 aa)
MWAWRVRAEWGRGVERRKRRQRLELGLHWLEIEEGANKWAPPVGDPEREGGGRRLGHGLGLAQ*

>peptide 5 (91 aa)
MDPSSCPYLFWRVCNHHFTTKTFLCPRCYVTLFGSNVMRTKLSPLETRLIVRGQPQLILHLYISLSRHRSTRVLFRSKFSVAILPCNLVIN*

>peptide 6 (30 aa)
MHSTVRYQQTQERRRICFLLVQSLPFILNY*

>peptide 7 (31 aa)
MNVQVIKILSCRPCLGTPKNFAPVMVPQLYQ*

>peptide 8 (31 aa)
MAMIYTRFGPNTCLPSRPIVILLILFYQYIV*

>peptide 9 (46 aa)
MDSSFFFFSLVSTPDRVSLILHFILHLCSTTHGRIHIGFASKKKWH*

>peptide 10 (33 aa)
MNGVWKCKKFEHPTLTQLHKLYEKLEKCTQLDR*

>peptide 11 (47 aa)
MSVNRETNLLSLINPPLANFYCSTTLSNRGAIRLKRFVSQISRNLCN*

>peptide 12 (46 aa)
MSISILESLQSSFYYKDFFMSTVLRHLIWVECDAYQVESIRDTPYS*

>peptide 13 (86 aa)
MFHENKCDLLSPTYFSLDRAENGWKFVVLRPIKDLTLLEKHGHDLHPFWTEYMSSEQANSYIINTLLPIYSLINNDHPFENGGGSS*

Sequence

>CNT30576920
TTTGTACAAGATTCCTCTATCAATTGGAGAGGAATAGTAGCACTCGACAATTATACAAATAGAACCCCAGTTAGGTAACGTGATTTCATTCGTATAGCCG
AGGAAGAAAAATACAAGCAAATCATCCGGGCTATGTTTGAGTGTATGGCCTTGCACCAAATATGCCTCATTAACATATGAACGGGGTGTGGAAATGTAAG
AAATTTGAGCATCCGACACTAACCCAACTTCATAAGCTATACGAGAAACTAGAGAAGTGCACTCAATTGGACCGGTAGCCCTCAACCTCGCGAAACCAAC
AGTGGCGACGGCACGACTCGGTGGCTAGCTGCGGCCGAAGGCGGTGGCGGTGGGTGTGATAGCGCGGGCGCAATAGAAGGCACGGGAGGAGGCGGCGAGT
GAGGAAAAGGAGGGGGCGCGGGAGAGAATCTTATAGGTCCGGGGAGAGGAGTTTGTGGCCAGGAGGTGCCCCTATTTTGCCGACGACGTGGGGGAGGTGG
CCCTATGGCCGCGCGCACGTGCCGCCATCTCGCAGGCGCGACACGTATGGGAAAGGCGAGGGAGTGGGCGGGCAATGTGGGCGTGGCGCGTGCGCGCAGA
GTGGGGGCGTGGGGTGGAGCGGAGGAAGCGGCGGCAGCGGTTGGAGCTGGGGCTCCACTGGCTGGAGATTGAGGAAGGGGCCAACAAGTGGGCCCCACCT
GTCGGTGACCCTGAGCGGGAAGGAGGCGGGCGCCGACTGGGCCACGGCCTCGGCCTGGCCCAGTGAGGTGGGAGGGAGCTTGCGGGCGAGGCAGACTAGG
CTGATGGCCTAAGAAAAGGAAAAAGGAAAAGGGATTTGCTGGGATTTAATTATTACCGAGAATTGATTTTAATTGGTTAAAATTATTTCCAAGCCTCTAA
AAATTCCACTAAAAATCATGTTAATATATTTAAACATGGGGAACTCAATAAAAATCCCACCATGTCATTTTCGATTATTAATTGCATTTATTAATTAGGT
ATCAGCTCTAGGTTAAATTAAATTATTTTTTGAGGCAATTTATTAACCGAATTAAGGCTAGAGAAAGGGGAAACTTCAGGGTGTGACATGTGTACTCATG
TTTTACTTAGAAATGATTGAGAGGGCCAAAAAGGGAGAGGATTTGCGCGGGCTGGATTCGGACTGAAGGACATCACAACTTGTGACAACTGCCACGACTT
CATACAAACTCCATTTTGGGCATGTAAGTACAAATGGATCCATCCTCATGTCCATATCTATTCTGGAGAGTCTGCAATCATCATTTTACTACAAAGACTT
TTTTATGTCCACGGTGCTACGTCACCTTATTTGGGTCGAATGTGATGCGTACCAAGTTGAGTCCATTAGAGACACGCCTTATAGTTAGAGGACAACCCCA
ACTCATTCTCCACCTATATATTTCCCTTAGCCGCCATAGATCAACTCGGGTTTTGTTTAGGTCAAAGTTTAGTGTCGCTATTTTGCCATGTAATCTTGTG
ATCAATTAGATTGTCGTTTTGCTCGTTACGGAACCCCACCTTTGACACTCTTGTTGATTTAATCCTACATCTTTATTCCGTAAATTGAGTTGCTTGTTTA
TCTTATTGTTTCTAGTTCTCGATTGCTTACAGAAACAATCACTCTTGTGGTTAGGCTGATTATGCATCCGCTCAGATTCAAGACTGCCTCTAGAGTTAGT
GTAATGATTGCTAACGCGCAACGTCTCTAGTCGGATCACCAACGTCGTTCCATTCAATCGGATTATCTTCTCTTCGGAAAATCTGCACACCCTCGCATCA
TCAACGCTGAACTTTTCTGCAAGTCTAAAAATCAATGGTATACGGCTAAACCGGATTCCTCCCAACTTTGAACTATCAATCTGAACTTTCCCCAAGAAAA
ATATATAAATTTGGTCGCTGTGAAATAAATTTGTAAAAATGATTTTGTCTAATTTTATACATTATTTTTTGGTGAAAAATTATACAGTATATCATTTCAT
CCATGCATCATGAATGTACAGGTAATCAAAATTTTATCATGTAGGCCCTGCTTGGGAACACCGAAAAATTTTGCACCTGTAATGGTGCCCCAACTTTACC
AGTGAAATAAAAAACAATGCAGGACAATCTGTTTTTTTTTTTTTAGGGGGGGGGGGGGGGGGAATAAGCTAAAATAGGAAAAATGAAAAGAAAATTCAGG
TTCATCCCAATTAGCAACAAAGATGTTCTCGGTTCGTATGATATCCCAGGCATCGAAGGTTTTAGATCAAAACAACATCAAATTAGAGAAATAGGAGAAA
TGAAAAGAAATTTATGGTTTAGCCGTGCAAATCATCAAGGCCAGCTCTTATGAAGACCGCAAATCAACAAGCCCAAACTCCCTTATCTTTTATGCGTTGA
TCAACATGGAGAGTCGAGCCTAGTGAGCCGAGCCCGATGTTTCACGAAAATAAGTGTGACCTCCTTAGCCCAACTTATTTTTCGCTGGATCGGGCTGAAA
ACGGGTGGAAATTTGTTGTGTTACGGCCCATCAAGGATTTAACTTTACTAGAGAAACATGGCCATGATTTACACCCGTTTTGGACCGAATACATGTCTTC
CGAGCAGGCCAATAGTTATATTATTAATACTCTTTTACCAATATATAGTCTGATAAATAATGATCATCCTTTCGAGAACGGAGGTGGTAGTAGTTAAAAA
TTGACTTGTCTCTATAATAACAATACAAACACCAACATAGACACTAATACTCACGCATGGACACTATAAACGCATATACATACATCATATTCTTATGAGC
ACCTTTAAACATTTTTTTTTCACATAAATATGGATAGTTCTTTTTTTTTCTTTTCCCTGGTTTCAACCCCAGATAGAGTTTCTCTGATCCTTCATTTTAT
CTTACATCTTTGCTCTACCACTCATGGTAGAATACATATTGGTTTTGCTTCCAAGAAAAAATGGCACTGAATCTCTAGCACCGGCAACATAATAAACAAA
ATACAAAAGCAAATCTGCACAGACTGGATTTTATTTCATGATCCTTATTACGTCGTCGAAGGCCCCGGCATCCACAACTGTTCACAGTTGTTTTACACAC
AGCTTGACTGAAACCAGAATATTATCCACTGGACTGAAGTGCACTGGAATCTCAGGAATCATTTCCAGGATCCCAGGCAAGCAGGCAGCGTGCGACTGAA
ACTCTGAACATGCACTCCACAGTCCGCTACCAACAAACACAAGAAAGAAGACGCATCTGTTTCTTGCTAGTGCAAAGCTTGCCATTTATACTTAATTATT
AATAACTAAAGCAGCATTATTGCCAGTGCTTAAACTTGGCTAGCTAGCTATAGCTCTCATTGGGTTCAAGTTGACCTTAATGGAAGATTTAGGATAGTAT
TAATTAATTTCTCCACAGTGATCCATATGCATGTGTGTTTGTTTGGTGAGCTAAACAAAGTTTGGTGATGGTGATGCACAAGACCAAACAACCAGCTCCC
CTCAATTCCAGCATCGTGCTCTCATCAAATCTTTGAACAATTAACTGAAAAAGATCTGTAGCTAGCAACATGTCCGGTCTGGTCCCATCAGATTCAGATC
AACCATCACACAACACAACAAGATCAGGACCCTCCTAGGCTCCTAGCTAGCTAGCTACTACCTCCGTCCGAGAATATAACAACTTTTTTGCTATAAATTT
GGAAACACAGTTGTCCAGATTCATAGTTAAAAATGCTTATATTTTGGGACGGAGGGAGTAGCTACATGAGGTCTCTTAACTTCGGGGGTGTTTAGATCCA
GGGGTGTAAAGTTTAATTTGGCGTGTCACATAGGATATTATATAGGGTATCACATGGGGTGTTCGGTACTAATAAAAAAACTAATTACAGAATATGTCAG
TAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCACCATTAGCAAATTTTTACTGTAGCACCACATTGTCAAATCGTGGAGCAATTAGGCTTAAAAG
ATTCGTCTCACAAATTAGTCGCAATCTGTGCAATTAGTTATTTTTTTAGCCTATATTTAATACTTCATATAAGTGTTCAAACGTTCGATGTGTCAGGGTG
AAAATTTTTGGGGTGGGATCTAAACAGGGCCTTCCATATAACTTACTCCATTTGTTCCAAATTACTTATTATTCTAGCTTTGTTTTAAATCAAATATTTA
TATTTTACTATTAGTTTTTAGAAATTTGTATAGTTAAGCAACATGTGAATTATATA