« Back to Oryza barthii search


Detailed information on CNT30576815


BLAST search results

BLAST vs Swiss-Prot:
sp|C0LGP4|Y3475_ARATH, E-value = 7e-11

BLAST vs NONCODE:
NONORUT005534, E-value = 6e-142

Expression of CNT30576815

Peptides detected in this lncRNA

>peptide 1 (47 aa)
VRLAGEEFHVPPPPLLLQPPARPPFLPNPPPPFPSPRPPCHRRRLFR*

>peptide 2 (70 aa)
STRRRGVPRAAAAASPPAAGAASLPTQSSASVPISSSSVPPPAPLPLNPSPPPHLFANAASHPLFSPGSG*

>peptide 3 (34 aa)
MDKIYRKCPVNPLPDAQISHKHGICGSLPSEHFK*

>peptide 4 (57 aa)
FDSPARSSTCRRRRFSSSRRRGLPSYPILRLRSHLLVLRATAGASSAESISTSSPIR*

Sequence

>CNT30576815
GTTCGACTCGCCGGCGAGGAGTTCCACGTGCCGCCGCCGCCGCTTCTCCTCCAGCCGCCGGCGCGGCCTCCCTTCCTACCCAATCCTCCGCCTCCGTTCC
CATCTCCTCGTCCTCCGTGCCACCGCCGGCGCCTCTTCCGCTGAATCCATCTCCACCTCCTCACCTATTCGCTAACGCCGCCTCCCATCCTCTCTTCTCT
CCGGGCTCCGGCTAGATCCAAGTCGGCGTCGAGATCCAGGGCTCGGAAACTCCTCATCTATCCAAGGATTTCAGCGTCACGACCACATCCCTCATTTCCA
TCCTTTGCTCTGGGGAGTCAGCCGAGCAGAGCAAGCCCAGCTCGAAGACTGGCTTAAGGAATCTATCAATGCTACTGGTAGAACAAGAGGTGTCCTGTAC
AAGCTGGCCATCGACAACATGGACAAGATCTATAGGAAATGCCCGGTGAACCCACTGCCTGATGCTCAGATCTCCCACAAACATGGCATCTGTGGGTCTC
TTCCTAGTGAACACTTCAAGTAGCATGATCCCATAGCTGAACAC