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Detailed information on CNT30576697


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YH64|CATA2_ORYSI, E-value = 2e-90

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673657Oryza barthiiSetaria viridis17.0530.7194.5974forward
CNT30640190Oryza barthiiNymphaea colorata35.9418.1282.05156forward
CNT30516671Oryza barthiiJuglans regia31.5729.2786.13137forward
CNT3021611Oryza barthiiCitrullus lanatus33.1836.2786.81144forward
CNT30708944Oryza barthiiGlycine max20.9715.9983.5291forward
CNT3046375Oryza barthiiPrunus dulcis73.2745.5680.5318forward
CNT30168584Oryza barthiiPistacia vera22.1235.4283.3396forward
CNT30305192Oryza barthiiTriticum aestivum84.7967.989.95368forward
CNT3085325Oryza barthiiVigna radiata26.7316.4182.76116forward
CNT30668770Oryza barthiiTriticum dicoccoides84.7948.0490.22368forward
CNT3080335Oryza barthiiBrassica juncea22.1216.9382.2996forward
CNT30263082Oryza barthiiBrassica rapa16.3621.1985.9271forward
CNT30475173Oryza barthiiSaccharum spontaneum84.149.1387.4365forward
CNT30654455Oryza barthiiRosa chinensis31.5729.9889.78137forward
CNT30624536Oryza barthiiDaucus carota27.658.5482.5120forward
CNT30368538Oryza barthiiSorghum bicolor79.0357.1787.76343forward
CNT30370393Oryza barthiiOryza glumipatula29.9555.32100130forward
CNT30154060Oryza barthiiPrunus persica33.1814.3484.72144forward
CNT30704835Oryza barthiiPrunus avium39.1756.8682.35170forward
CNT3022395Oryza barthiiPopulus trichocarpa26.0427.4985.84113forward
CNT3038372Oryza barthiiCucumis melo39.1715.4582.94170forward
CNT30116279Oryza barthiiOryza nivara25.355.5481.82110forward
CNT3050211Oryza barthiiCucumis sativus32.9538.0384.62143forward

Expression of CNT30576697

Peptides detected in this lncRNA

>peptide 1 (92 aa)
SNWLQGDDILWPCLGDIKRIEVKSVLMIRINSLDVKLPLWVIPCCNRISQVLRGMAVAGAANSHSFIIQQAFDTTGRLPVEFDKVRLSILID*

>peptide 2 (33 aa)
MPTSSKRKENMCREFHPISDKKDRHIVPNKIKIT

Sequence

>CNT30576697
CGTCCAACTGGCTGCAGGGGGATGATATCCTCTGGCCATGTCTTGGTGACATCAAGAGGATCGAAGTCAAATCTGTCCTCATGATCAGGATCAATAGTCT
GGATGTAAAGCTTCCACTCTGGGTAATTCCCTGCTGCAATAGAATCAGTCAAGTCCTTCGTGGCATGGCTGTGGCAGGTGCCGCCAACAGTCACAGCTTC
ATCATCCAACAGGCATTTGACACCACAGGTAGGCTTCCAGTGGAATTTGACAAGGTGAGGCTTTCCATCCTTATTGATTAGGGTGTAGGTGTTGACACCA
AAACCCTCCATGTGCCTGTAGTTGAGTGGGATGCCTACATCGTCAAAGAGGAAGGAGAACATGTGCAGGGAATTTCATCCCATCTCGGATAAAAAAGACA
GGCATATTGTTCCCAACAAGATCAAAATTACCCT