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Detailed information on CNT30576673


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102111Oryza barthiiOryza rufipogon100.1485.5598.65740forward

Expression of CNT30576673

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MFLGAFQLPMLARGVWRSFKANVCRSISGTILTLQVPMPFFS*

Sequence

>CNT30576673
AGCAAATTGAAGCGCGATGAGAAATAGTGCCTCTTTGCTGAACTTTTTTTCTTTTTTGGCACAAGTGAAGCATGCACCTAGCTAGGATGCTTCGAAAAAC
TAATTAGCAGCCAGATACAGCCATCGTCGCAAGCCTGGCCACAAATCGCCTCATTGGGATCTCAATCTATTTGAACCTCCTACGTACATGGCGTGCAACT
GAAAATCTGAAATGCTCCTTCAGACATCCAGCTTGAAGCTCCTGTAAAGTGGATGTTTTTAGGAGCATTTCAGTTGCCCATGCTAGCCAGAGGTGTCTGG
AGGAGCTTCAAAGCAAATGTCTGCAGGAGCATCTCAGGTACCATTTTGACCTTACAAGTTCCTATGCCCTTCTTCAGCTGATTCTCTTGGTACAGTGATG
GAAGATCCCCGCGCTACTGTTTCTGTAGGGTGTTCCATCACAAGCTGAATTCGCGCCTGGGTAATTCCAGATACCTGCCATGCCATGTCGCTCAAATGGG
CTTGAGGCCTAGAGGGCGAGCTAGCGAAGGACAAAGGAGGGGAAATCGAAGAGGTGGAAGCTAAGACTCAGTATACGATTGCACATTTCACTCAAGTTGT
ATGCGAGTTTAAATAAGTTCGAGGCAAGGTTCTTGCGTGATGAAGGGTAGGTGGATGAGATAATTTTGCGTGTGGATAAGGCCTGGTTTAGTTCCTAATT
TTTTTCCCAAAAACGTTATATCGAATCTTTGGACAAATG