Detailed information on CNT30576608


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554061Oryza barthiiOryza glaberrima43.4839.3499.35310forward

Expression of CNT30576608

Peptides detected in this lncRNA

>peptide 1 (59 aa)
EPYFSLSSHGRPSTDLPYRSVVGQVLAPLASSHRGESIPSLPLPFPLQNKPPTPPPLTG*

Sequence

>CNT30576608
TCGAGCCCTACTTTTCTCTCTCTAGCCATGGCCGGCCGTCCACCGATCTCCCTTACCGGAGCGTTGTAGGCCAAGTCCTCGCGCCACTAGCTTCTTCTCA
TCGAGGCGAATCCATTCCCTCGCTTCCCCTTCCTTTCCCCCTCCAAAATAAGCCGCCAACGCCACCTCCTCTAACCGGCTGAAGCAAGCTTTTACGCTCG
CCGTTCCGGCCTCCTCCCCTAACTCATTCGCTGGCCGACAACTTCCCCGGGTGCGCGTCGCTCGAGAACACGCTTGGCCGCCGGCGTCTCCGCCTTCCGG
CCACTGGAGCACCGGCGCCCCTCCTCTCTCTCCTCTCGGCTGTTAACAGAAGAAAAGAAGAAAGAAGACGGGAGGAAGGAGGAGAAAAAGAAAAAGAAAA
GATTCCTGACAGTAGAGTCTATTATAATTGGATGGCAACCTGTGGTATTTCGAGCATCGGATAATCAGGTTGCCTATCTCGGATTTATTTGTGTTGGAGC
AAGAGTCATTTTGGAGTTCTTATCGAAGCTGGGAGTTCAATCACGTTAGTTCCCTTTAAACCTAGTCTTCAAGTCTAGTATAGTTAGATGGTTTAACTCT
ATAGCAAAACATTAGAGTTGGTTCATTCTATAGCTTCTGCTGTATTAGTTAGCCACAAGTTTGTAAATACCCATATATTTTGTAATAACATCTCCTTTGG
AGCCTTGATCAAA