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Detailed information on CNT30576589


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 1e-69

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-71

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067606Oryza barthiiLeersia perrieri61.9229.4395.02522forward
CNT30583297Oryza barthiiEchinochloa crusgalli55.6324.492.11469forward

Expression of CNT30576589

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MIRDHLFIIVLPCCSTTAKRFRHHQTRLTDTHYR*

>peptide 2 (49 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKICICTHNYR

>peptide 3 (76 aa)
MRRCWSGGXPSLSWILAFTLSIVSEDSTSSVMVLPVRVLTKICIPPLSLSTRWRVDSFWMLYRPGCGHPQAACQRR*

>peptide 4 (30 aa)
GSNTNVYSTQSEQEHNLDKFVCQIKFLSKT*

Sequence

>CNT30576589
CGGTAGCAATACAAATGTGTACAGTACACAGTCAGAACAAGAGCATAATTTAGACAAATTTGTTTGTCAGATCAAATTTTTAAGCAAAACATAAGAAACA
GCACAAAAGGGTATAGCAGAAGCAAAATTTGGATACAATGATTAGGGATCACTTATTCATTATAGTTCTTCCATGCTGCTCTACCACAGCAAAACGTTTC
AGACACCATCAAACCAGACTTACGGATACGCATTACAGGTAAATAGTACACAATGAAACGGGACACGACTAAGGACCAGACCAGACAACCATAGCTCCAT
TGGGGAAGACAATAGGCAGACTTGTGAACCCTAGAACAGCAGCAGCTCCATGGCTGAGGACTTACTGGCCACCACGGAGGCGGAGCACCAGGTGGAGTGT
TGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATNCCCTCCTTG
TCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATACCAC
CCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTATCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGC
TGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGA
GGGTCTTCACAAAGATCTGCATCTGCACACACAATTACCGAAG