Detailed information on CNT30576573


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693805Oryza barthiiOryza sativa61.9644.65100171forward
CNT30389287Oryza barthiiTriticum turgidum23.9112.3687.8866forward
CNT30553860Oryza barthiiOryza glaberrima98.1971.8897.79271forward
CNT30681819Oryza barthiiTriticum urartu24.2811.1788.0667forward
CNT30349660Oryza barthiiEragrostis tef27.919.6490.9177forward
CNT30101935Oryza barthiiOryza rufipogon61.9639.95100171forward
CNT30556906Oryza barthiiPanicum hallii27.913.2889.6177forward

Expression of CNT30576573

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MMIDDPSKLARDPSNIDRHTHTLTTTTTVLFSCRSSRSSRCSWCHTCRCCSRSRRSRRSPPPSPFL

Sequence

>CNT30576573
TGAAAGCAGAGGTAGATTATATTAAGAAGCCTGGCACGCATGAGGAGATGGAGCAGGAGTACATGATGAGATCACCATGATGATAGATGATCCATCCAAG
CTAGCTAGGGATCCATCCAACATTGATCGACACACGCACACACTGACAACGACGACGACGGTTTTATTTAGTTGCAGGAGCAGCAGGAGCAGCCGCTGCA
GCTGGTGCCACACTTGCAGGTGTTGCAGCCGCAGCCGCCGTTCTCGCCGCTCTCCACCGCCATCTCCATTCCTCCA