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Detailed information on CNT30576570


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30101650Oryza barthiiOryza rufipogon91.3296.7999.57936forward

Expression of CNT30576570

Peptides detected in this lncRNA

>peptide 1 (46 aa)
PRPLFPTNVETVGSFSNSTSFLGLPGPLFPIEEAPSESRHLTSPPF*

>peptide 2 (30 aa)
MQAAEQRERQQQQHSCAASQVPASLPVSTG*

Sequence

>CNT30576570
CCACGGCCTCTCTTTCCCACCAATGTAGAAACTGTAGGTTCATTTTCCAATAGCACCTCCTTCCTAGGACTCCCAGGCCCTCTGTTCCCCATTGAAGAAG
CACCATCAGAGAGCAGACACCTAACTTCACCTCCATTTTGAACGGCTCCAGCCTCACCTCCATCTGCAGTGTCTACCTGTGCTGCCACAACACCTCCAGC
TTCCAGTGGCCTCTTCTTTCTTGGCCTCCCAGGCCCTCTCTTAGTCATTGCAGCACCGCCAGAGAGCACAGACCAAGATTGCAATGGTTTATCCTTTCTA
GGGCGCCCACGGCCACGCTTCACTCCCAACACAGCAGCAGCAGTGGGTGGCACTGACAGCACAGGAGGAGTGGCATTCTTGCGAGGGCGGCCAGGTCCAC
GTTTGAATCCAGACGGCCTCCCAGGTCCAGGCTTGACTAGAGGAGTGGCGTTCTTCCTTGGGCGTCCAACACCCCGCTTCAGTGGAGATGCAGGCGGCGG
AGCAACGGGAGAGGCAGCAGCAGCAGCATTCTTGCGCGGCCTCCCAGGTCCCCGCTTCACTCCCAGTCTCAACGGGGTAGCAGCAGCATTCTTGCGCGGC
CTCCCAGGTCCCCGCTTCACTCTCAGGCTCAACGCCGTAGCAGCAGCAGCAGAGGAGGTGGAGGAAGCCACAGGGAGAGGGTTCTTCCGGGGTCGCCCGC
GCCCAGGCTTCGCCTCAAGCACAGGAACCGGAAACAGGGCTGTATTCTTGCGGGGTCGGCCGGGTCCGCGCTTTTGAGGCGGCGCGGAGGAGGAAGCTTT
CTTGGGCGGTCGTCCTCGTCCCCGTCCTCGAGCGGCGGTGGCGGAGGTGGAGAGAAGGTACGAGTGTCCAGACATGAGGAGAAGGCCCTGTGACCTGAGG
CGGCGGAGGTGAACGGTGAGGAGCGCGTCGTGGTGAGAAGGGAGGCCGGAGAAGTTGTCGGAGATGTACTTGGCGATGGCACGGCGGCTGGAGATGATCG
GATCTGGAAGCTCCTTGAGCGCCCG