CANTATAdb - search

Detailed information on CNT30576528

BLAST search results

BLAST vs Swiss-Prot:
sp|A2Y609|CALM2_ORYSI, E-value = 4e-54

BLAST vs NONCODE:
NONSLYT003545, E-value = 8e-46

Expression of CNT30576528

Peptides detected in this lncRNA

>peptide 1 (32 aa)
RLQPFNSARNREVKMMIERNQAMHICTTIQEK*

>peptide 2 (71 aa)
MTWRSSAAEMKPFWSLSNTRKASLSSSSESVSFIFFAISINLVDHVLQLRLSWVLTKGPHHGSKLLSSDATC

>peptide 3 (63 aa)
KAATIQFSTQQGSKDDDRKEPGNAYLHNDPRKMMKPQQILCSGRRKISITIKRNQASDVVSHD*

Sequence

>CNT30576528
GAAGGCTGCAACCATTCAATTCAGCACGCAACAGGGAAGTAAAGATGATGATAGAAAGGAACCAGGCAATGCATATCTGCACAACGATCCAAGAAAAATG
ATGAAACCCCAACAAATCCTATGCTCCGGCAGGCGCAAGATAAGCATCACAATCAAAAGAAACCAGGCATCTGATGTTGTTTCGCATGACTAGACCACCT
AACCCGATCCCTACTCAACATTACCACCAGCAAAGATAGGTACTTAAAAGGAACATCACAAAGTACAGCTTTGTTGTAGGCCCTGACAGTTTTAGTTCAC
TTCAGACAGAACTTATTTAATGGGAACCCTCCTCACTTGGCCATCATGACCTTAACGAACTCCTCGTAGTTGATCTGGCCATCGCCATCGACGTCAGCCT
CACGGATCATCTCGTCAACTTCCTCGTCGGTCAGCTTCTCACCAAGGTTGGTCATGACGTGGCGGAGCTCAGCAGCCGAGATGAAACCGTTCTGGTCCTT
GTCAAACACACGGAAGGCCTCCTTGAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCTTCGCCATCAGCATCAACCTCGTTGATCATGTCCTGCAGCTC
CGCCTCAGTTGGGTTCTGACCAAGGGACCGCATCACGGTTCCAAGCTCCTTAGTAGTGATGCAACCTGC