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Detailed information on CNT30576479


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SFT7|PBL26_ARATH, E-value = 3e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693399Oryza barthiiOryza sativa52.4434.96100322forward
CNT30286068Oryza barthiiTriticum aestivum15.1542.6692.4793forward
CNT30143209Oryza barthiiLolium perenne24.7611.4684.21152forward

Expression of CNT30576479

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSLIYGRTEASSSMHIAATAAAWLKSLSG*

>peptide 2 (40 aa)
MFATNRYCVYLAIFKLSLVDPAKAPLSQKTVRTEVIGGCR*

>peptide 3 (34 aa)
MKSSSSSSIAPFDGLSNCSLTVKCALIFLGVTSY*

Sequence

>CNT30576479
AATGTTTGCCACTAATCGTTATTGTGTATACCTGGCCATTTTCAAGCTGTCCCTTGTAGACCCTGCCAAAGCCCCCCTCTCCCAGAAGACGGTCAGAACG
GAAGTTATTGGTGGCTGTCGCTAGCTCACGGAACGTGAATTTTTTTCCAGTTCTGGCAGTAACTGGGCTTCCATTGTGTGGTTCAGTATTTACTGCTGCT
TCAGATGATTGCTTGTGGTCTGAGGAGACACATGGCAACTTTTCCGATTCTGCAGTGGCTTGAAGCATGAAAAGCAGCTCATCTTCGTCAATAGCCCCAT
TCGATGGCCTCAGCAACTGCTCGTTGACGGTCAAATGTGCTTTGATCTTTCTTGGTGTTACCAGTTACTGAAGGATCTTCATCCTTTCTGTTCTGGGGTT
CAGCGTTAATCCTCTCTTCACAACCTGCGGGTACTTCTGCGAGGAATCCCAATGCAACAACAATGTCACTCATATATGGCCGAACTGAGGCTTCATCTTC
TATGCATATCGCTGCCACGGCCGCAGCTTGGTTAAAATCTTTGTCTGGATAGTCACCTCTAAGAAGAGGGTCTACCAGCTCATGGTACCTCCTCCGATCA
TGAAGCATGGGTTT