Detailed information on CNT30576403


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693369Oryza barthiiOryza sativa86.119399.64279forward
CNT30101834Oryza barthiiOryza rufipogon10080.699.38324forward

Expression of CNT30576403

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MAQQQHLMLAMTKDFLVAIFQSWIHFLRNLAASFLENQLQHHHWI

Sequence

>CNT30576403
CAGCTTGACTGATTCCTGCTCGTTCAACTTTGTCTTTTGCAGTAAAAGAGGACATAGCCTGAGAGGTACTGCCCATTGTAACAGCTAGTCCATTGTTTGT
AGGTGGCCTCAACTGCACTGTACATACTGGAGTGAAATTTGATGCATTGGTAATACTGGGAGGAGCTGAAACCTGAGACGGGACTTGATATGGCACAGCA
GCAACATTTGATGCTTGCAATGACAAAGGATTTCCTTGTGGCAATTTTCCAGAGCTGGATTCACTTCCTGAGAAACTTGGCTGCCTCTTTCCTTGAAAAC
CAACTGCAGCATCATCACTGGATC