CANTATAdb - search

Detailed information on CNT30576402

BLAST search results

BLAST vs Swiss-Prot:
sp|A2Y609|CALM2_ORYSI, E-value = 2e-70

BLAST vs NONCODE:
NONPOPT000052, E-value = 2e-80

Expression of CNT30576402

Peptides detected in this lncRNA

>peptide 1 (65 aa)
RGKAATIQFSTQQGSKDDDRKEPGNAYLHNDPRKMMKPQQILCSGRRKISITIKRNQASDVVSHD*

>peptide 2 (35 aa)
CGGRLQPFNSARNREVKMMIERNQAMHICTTIQEK*

>peptide 3 (96 aa)
MTWRSSAAEMKPFWSLSNTRKASLSSSSESVSFIFFAIRFRNSGKSMVPLPSASTSLIMSCSSASVGGVEASRRFRERRRGRKGNEWRGGGGEEMAV

Sequence

>CNT30576402
TGCGGGGGAAGGCTGCAACCATTCAATTCAGCACGCAACAGGGAAGTAAAGATGATGATAGAAAGGAACCAGGCAATGCATATCTGCACAACGATCCAAG
AAAAATGATGAAACCCCAACAAATCCTATGCTCCGGCAGGCGCAAGATAAGCATCACAATCAAAAGAAACCAGGCATCTGATGTTGTTTCGCATGACTAG
ACCACCTAACCCGATCCCTACTCAACATTACCACCAGCAAAGATAGGTACTTAAAAGGAACATCACAAAGTACAGCTTTGTTGTAGGCCCTGACAGTTTT
AGTTCACTTCAGACAGAACTTATTTAATGGGAACCCTCCTCACTTGGCCATCATGACCTTAACGAACTCCTCGTAGTTGATCTGGCCATCGCCATCGACG
TCAGCCTCACGGATCATCTCGTCAACTTCCTCGTCGGTCAGCTTCTCACCAAGGTTGGTCATGACGTGGCGGAGCTCAGCAGCCGAGATGAAACCGTTCT
GGTCCTTGTCAAACACACGGAAGGCCTCCTTGAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCTTCGCCATCAGGTTCAGGAACTCTGGGAAGTCAAT
GGTCCCATTGCCATCAGCATCAACCTCGTTGATCATGTCCTGCAGCTCCGCCTCAGTTGGGGGTGTGGAAGCTTCGAGAAGGTTCCGCGAGAGGAGGAGA
GGAAGGAAGGGGAACGAGTGGCGAGGTGGGGGTGGAGAAGAGATGGCTGTGGC